RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB76780" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

bioproject 1

  • PRJEB76780 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1413455 1413455 PRJEB76780_P_NODE_8942_length_271_cov_6.459596_g8842_i0 PRJEB76780 8942 271 6.459596 17.50550516 Mitovirus sp. 2587224 Viruses Viruses 124 5.1899999999999996e-24   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g8842 i0 92.045 0.324723247232472 88 7 32 0 19 106 24 111 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 88 124 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
7790997 7790997 PRJEB76780_P_NODE_11687_length_248_cov_0.891429_g11587_i0 PRJEB76780 11687 248 0.891429 2.21074392 Raphidovirus japonicum 3432138 Viruses Viruses 73.1 1.72e-8   NTclustered gi|1464309061|ref|NC_038553.1| 97195 g11587 i0 97.619 6.83467741935484 42 1 19 0 1 42 94818 94777 Heterosigma akashiwo virus 01 isolate HaV53, complete genome blastn 1695 73.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Raphidovirus Raphidovirus japonicum
9066009 9066009 PRJEB76780_P_NODE_12288_length_246_cov_0.901734_g12188_i0 PRJEB76780 12288 246 0.901734 2.21826564 Caudoviricetes sp. 2832643 Viruses Viruses 313 9.23e-81   NTclustered gi|2914781736|gb|OR222343.1| 2832643 g12188 i0 90.948 5.78048780487805 232 21 94 0 3 234 6860 7091 MAG: Caudoviricetes sp. isolate MSP1055 genomic sequence blastn 1422 313 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;