RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJEB76780" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB76780 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5241335 5241335 PRJEB76780_P_NODE_13265_length_242_cov_0.923077_g13165_i0 PRJEB76780 13265 242 0.923077 2.23384634 Patella vulgata 6465 Mollusca Mollusca 54.7 0.006   NTclustered gi|2506312474|ref|XM_056098823.1| 6465 g13165 i0 100 0.119834710743802 29 0 12 0 84 112 2034 2006 PREDICTED: Patella vulgata uncharacterized LOC126810661 (LOC126810661), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
6516932 6516932 PRJEB76780_P_NODE_5946_length_331_cov_2.972868_g5846_i0 PRJEB76780 5946 331 2.972868 9.84019308 Physella acuta 109671 Mollusca Mollusca 501 2.58e-137   NTclustered gi|2572452079|ref|XR_009385380.1| 109671 g5846 i0 94.012 4.26586102719033 334 15 100 5 1 331 3418 3749 PREDICTED: Physella acuta large subunit ribosomal RNA (LOC131933988), rRNA blastn 1412 501 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
6516958 6516958 PRJEB76780_P_NODE_8626_length_276_cov_1.482759_g8526_i0 PRJEB76780 8626 276 1.482759 4.09241484 Liolophura japonica 13599 Mollusca Mollusca 150 8.75e-32   NTclustered gi|2724229117|ref|XM_064739502.1| 13599 g8526 i0 77.6 6.2536231884058 250 54 90 2 1 249 1328 1080 PREDICTED: Liolophura japonica histone-binding protein RBBP4 (LOC135462132), transcript variant X2, mRNA blastn 1726 150 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Chitonida Chitonidae Liolophura Liolophura japonica
16715471 16715471 PRJEB76780_P_NODE_3634_length_429_cov_0.859551_g3534_i0 PRJEB76780 3634 429 0.859551 3.68747379 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.003   NTclustered gi|2912992646|dbj|AP039597.1| 145626 g3534 i0 100 0.0699300699300699 30 0 7 0 396 425 64050796 64050767 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 16, sequence blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
19264313 19264313 PRJEB76780_P_NODE_5496_length_345_cov_1.422794_g5396_i0 PRJEB76780 5496 345 1.422794 4.9086393 Mya arenaria 6604 Mollusca Mollusca 56.5 0.003   NTclustered gi|2427516970|ref|XM_052958147.1| 6604 g5396 i0 96.97 0.191304347826087 33 1 10 0 208 240 3361 3393 PREDICTED: Mya arenaria myosin heavy chain, striated muscle-like (LOC128241187), mRNA blastn 66 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
21398557 21398557 PRJEB76780_P_NODE_7157_length_302_cov_1.362445_g7057_i0 PRJEB76780 7157 302 1.362445 4.1145839 root 1 Root_unresolved Root_unresolved 54.7 0.008   NTclustered gi|2911868421|ref|XM_071258531.1| 6455 g7057 i0 100 0.596026490066225 29 0 10 0 265 293 609 581 PREDICTED: Haliotis cracherodii accessory gland protein Acp36DE-like (LOC139475303), mRNA blastn 180 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis cracherodii
23090771 23090771 PRJEB76780_P_NODE_9019_length_270_cov_2.172589_g8919_i0 PRJEB76780 9019 270 2.172589 5.8659903 Patella vulgata 6465 Mollusca Mollusca 182 3.03e-41   NTclustered gi|2506330923|ref|XM_050549233.2| 6465 g8919 i0 82.759 57.7814814814815 203 35 75 0 11 213 351 149 PREDICTED: Patella vulgata ras-related protein Rab-1A (LOC126820989), mRNA blastn 15601 182 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
23948879 23948879 PRJEB76780_P_NODE_13479_length_240_cov_2.101796_g13379_i0 PRJEB76780 13479 240 2.101796 5.0443104 Metazoa 33208 Mollusca Mollusca 394 3.11e-105   NTclustered gi|2572452079|ref|XR_009385380.1| 109671 g13379 i0 96.266 96.3708333333333 241 8 100 1 1 240 1109 869 PREDICTED: Physella acuta large subunit ribosomal RNA (LOC131933988), rRNA blastn 23129 396 0.994949494949495 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
24364626 24364626 PRJEB76780_P_NODE_9220_length_267_cov_3.432990_g9120_i0 PRJEB76780 9220 267 3.43299 9.1660833 Mytilus trossulus 6551 Mollusca Mollusca 143 1.41e-29   NTclustered gi|2694094411|ref|XM_063585322.1| 6551 g9120 i0 81.111 5.70786516853933 180 32 67 2 1 179 479 657 PREDICTED: Mytilus trossulus ras-related protein Rab-2 (LOC134721970), mRNA blastn 1524 143 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;