RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJEB76780" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB76780 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1413413 1413413 PRJEB76780_P_NODE_4022_length_407_cov_1.392216_g3922_i0 PRJEB76780 4022 407 1.392216 5.66631912 Hydra vulgaris 6087 Cnidaria other_Eukaryota 364 4.419999999999999e-96   NTclustered gi|2744881902|ref|XM_065807116.1| 6087 g3922 i0 83.085 85.3316953316953 402 66 99 2 7 407 823 423 PREDICTED: Hydra vulgaris serine/threonine-protein phosphatase alpha-2 isoform (LOC100198416), mRNA blastn 34730 364 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
3964901 3964901 PRJEB76780_P_NODE_2344_length_539_cov_6.386266_g2244_i0 PRJEB76780 2344 539 6.386266 34.42197374 Hydra vulgaris 6087 Cnidaria other_Eukaryota 298 6.16e-76   NTclustered gi|2744794010|ref|XM_012698561.3| 6087 g2244 i0 80.662 13.2003710575139 393 68 72 8 106 494 184 572 PREDICTED: Hydra vulgaris small ribosomal subunit protein uS11 (LOC100201565), transcript variant X1, mRNA blastn 7115 298 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
4824499 4824499 PRJEB76780_P_NODE_12664_length_244_cov_1.368421_g12564_i0 PRJEB76780 12664 244 1.368421 3.33894724 Metazoa 33208 Cnidaria other_Eukaryota 209 1.23e-49   NTclustered gi|2519002477|ref|XM_057452852.1| 13093 g12564 i0 83.628 65.8729508196721 226 33 92 3 7 230 1901 1678 PREDICTED: Hydractinia symbiolongicarpus dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A-like (LOC130647112), mRNA blastn 16073 209 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
9066102 9066102 PRJEB76780_P_NODE_9828_length_259_cov_1.258065_g9728_i0 PRJEB76780 9828 259 1.258065 3.25838835 Montipora capricornis 246305 Cnidaria other_Eukaryota 54.7 0.007   NTclustered gi|2812170650|ref|XM_068898093.1| 246305 g9728 i0 100 0.335907335907336 29 0 11 0 219 247 688 660 PREDICTED: Montipora capricornis uncharacterized protein (LOC138051817), transcript variant X2, mRNA blastn 87 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis
15441173 15441173 PRJEB76780_P_NODE_10693_length_252_cov_0.871508_g10593_i0 PRJEB76780 10693 252 0.871508 2.19620016 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 130 1.03e-25   NTclustered gi|2519006395|ref|XM_057454962.1| 13093 g10593 i0 77.778 2.07142857142857 216 45 85 3 38 251 503 289 PREDICTED: Hydractinia symbiolongicarpus AP-3 complex subunit sigma-1-like (LOC130648855), mRNA blastn 522 130 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
20539708 20539708 PRJEB76780_P_NODE_3437_length_440_cov_1.683924_g3337_i0 PRJEB76780 3437 440 1.683924 7.4092656 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 289 2.98e-73   NTclustered gi|2782883218|ref|XM_067064118.1| 252671 g3337 i0 80.533 7.43409090909091 375 73 85 0 5 379 403 777 PREDICTED: Clytia hemisphaerica protein transport protein Sec61 subunit alpha (LOC136807538), mRNA blastn 3271 289 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;