RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB76780" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB76780 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2271554 2271554 PRJEB76780_P_NODE_6042_length_328_cov_2.529412_g5942_i0 PRJEB76780 6042 328 2.529412 8.29647136 Metazoa 33208 Annelida Annelida 176 1.75e-39   NTclustered gi|675855085|ref|XM_009014855.1| 6412 g5942 i0 78.339 9.875 277 57 84 3 25 299 441 166 Helobdella robusta hypothetical protein mRNA blastn 3239 176 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
3964981 3964981 PRJEB76780_P_NODE_9684_length_261_cov_1.207447_g9584_i0 PRJEB76780 9684 261 1.207447 3.15143667 Hirudo verbana 311461 Annelida Annelida 63.9 1.1e-5   NTclustered gi|2918369702|emb|OZ237787.1| 311461 g9584 i0 93.182 6.64367816091954 44 2 16 1 3 45 1600311 1600268 Hirudo verbana genome assembly, chromosome: 9 blastn 1734 63.9 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
6516946 6516946 PRJEB76780_P_NODE_766_length_934_cov_2.288037_g690_i0 PRJEB76780 766 934 2.288037 21.37026558 Helobdella robusta 6412 Annelida Annelida 62.1 1.57e-4   NTclustered gi|675876331|ref|XM_009025478.1| 6412 g690 i0 94.872 1.12740899357602 39 2 4 0 425 463 870 908 Helobdella robusta hypothetical protein partial mRNA blastn 1053 62.1 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
7791004 7791004 PRJEB76780_P_NODE_12227_length_246_cov_0.901734_g12127_i0 PRJEB76780 12227 246 0.901734 2.21826564 Ailoscolex lacteospumosus 1046305 Annelida Annelida 67.6 7.94e-7   NTclustered gi|2920003418|emb|OZ238863.1| 1046305 g12127 i0 91.667 18.1626016260163 48 4 20 0 148 195 7512785 7512832 Ailoscolex lacteospumosus genome assembly, chromosome: 4 blastn 4468 67.6 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;