RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB76780" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 3 ✖

bioproject 1

  • PRJEB76780 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
996408 996408 PRJEB76780_P_NODE_12461_length_245_cov_0.906977_g12361_i0 PRJEB76780 12461 245 0.906977 2.22209365 Thermus 270 Bacteria Bacteria 303 5.53e-78   NTclustered gi|1886401075|gb|CP053288.1| 274 g12361 i0 99.401 48.3387755102041 167 1 100 0 79 245 97685 97851 Thermus thermophilus strain HB27c plasmid pTT27, complete sequence blastn 11843 303 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus thermophilus
10341778 10341778 PRJEB76780_P_NODE_13069_length_243_cov_0.917647_g12969_i0 PRJEB76780 13069 243 0.917647 2.22988221 Deinococcus maricopensis 309887 Bacteria Bacteria 115 2.7500000000000003e-21   NTclustered gi|319753907|gb|CP002454.1| 709986 g12969 i0 86.667 42.6707818930041 105 12 43 2 1 104 4060 4163 Deinococcus maricopensis DSM 21211, complete genome blastn 10369 115 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus maricopensis
11617340 11617340 PRJEB76780_P_NODE_9210_length_268_cov_1.138462_g9110_i0 PRJEB76780 9210 268 1.138462 3.05107816 Deinococcus sp. AJ005 2652443 Bacteria Bacteria 464 2.6599999999999998e-126   NTclustered gi|1761809830|gb|CP044990.1| 2652443 g9110 i0 97.778 190.805970149254 270 4 100 1 1 268 98386 98655 Deinococcus sp. AJ005 chromosome, complete genome blastn 51136 464 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. AJ005

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;