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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJEB76780" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 16 ✖

bioproject 1

  • PRJEB76780 · 16 ✖

analysis 1

  • blastn · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
138660 138660 PRJEB76780_P_NODE_10521_length_252_cov_1.307263_g10421_i0 PRJEB76780 10521 252 1.307263 3.29430276 Thaumatomonas sp. TMT002 407209 SAR_Eukaryotes SAR_Eukaryotes 222 1.65e-53   NTclustered gi|193875699|gb|EU812202.1| 407209 g10421 i0 83.333 69.1428571428571 246 35 96 6 1 243 317 75 Thaumatomonas sp. TMT002 clone tshsp70-1 70 kDa heat shock protein mRNA, partial cds blastn 17424 222 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas sp. TMT002
1413374 1413374 PRJEB76780_P_NODE_13442_length_242_cov_0.923077_g13342_i0 PRJEB76780 13442 242 0.923077 2.23384634 Sterkiella nova 200597 SAR_Eukaryotes SAR_Eukaryotes 165 2.68e-36   NTclustered gi|1051275|gb|U37280.1|ONU37280 200597 g13342 i0 81.068 5.45867768595041 206 39 85 0 27 232 1602 1807 Oxytricha nova Hsp70 gene, complete cds blastn 1321 165 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Sterkiella Sterkiella nova
3547018 3547018 PRJEB76780_P_NODE_7783_length_290_cov_0.903226_g7683_i0 PRJEB76780 7783 290 0.903226 2.6193554 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 536 6.079999999999999e-148   NTclustered gi|219524870|gb|EU709233.1| 175275 g7683 i0 100 99.0068965517241 290 0 100 0 1 290 810 521 Uncultured cercozoan isolate HetPan13 18S ribosomal RNA gene, partial sequence blastn 28712 536 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
3964944 3964944 PRJEB76780_P_NODE_6844_length_308_cov_1.527660_g6744_i0 PRJEB76780 6844 308 1.52766 4.7051928 Thaumatomonas seravini 188939 SAR_Eukaryotes SAR_Eukaryotes 375 1.5e-99   NTclustered gi|160337402|gb|EF455799.1| 188939 g6744 i0 88.636 98.8506493506493 308 35 100 0 1 308 273 580 Thaumatomonas seravini beta-tubulin (btub) gene, partial cds blastn 30446 375 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas seravini
5241347 5241347 PRJEB76780_P_NODE_2645_length_504_cov_3.361949_g2545_i0 PRJEB76780 2645 504 3.361949 16.94422296 Hyaloperonospora parasitica 123356 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.014   NTclustered gi|170285697|emb|CU672270.3| 123356 g2545 i0 100 0.0575396825396825 29 0 6 0 474 502 1789 1761 H.parasitica DNA sequence from clone HpEmoy2-20J10, complete sequence blastn 29 54.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora parasitica
5241354 5241354 PRJEB76780_P_NODE_3785_length_419_cov_1.578035_g3685_i0 PRJEB76780 3785 419 1.578035 6.61196665 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.011   NTclustered gi|921118745|ref|XM_013578538.1| 51315 g3685 i0 94.286 0.217183770883055 35 2 8 0 204 238 535 569 Eimeria necatrix 5'-3' exoribonuclease 2, related partial mRNA blastn 91 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
5241358 5241358 PRJEB76780_P_NODE_3905_length_412_cov_1.643068_g3805_i0 PRJEB76780 3905 412 1.643068 6.76944016 Lithodesmioides sp. mgcode 4 2914905 SAR_Eukaryotes SAR_Eukaryotes 147 1.77e-30   NTclustered gi|2073953334|gb|MW849271.1| 2914905 g3805 i0 78.298 1.9126213592233 235 45 57 5 68 301 26938 27167 Lithodesmioides sp. mgcode 4 isolate Qingdao in China mitochondrion, complete genome blastn 788 147 1 Eukaryota Sar   Bacillariophyta Mediophyceae Lithodesmiales Lithodesmiaceae Lithodesmioides Lithodesmioides sp. mgcode 4
6099583 6099583 PRJEB76780_P_NODE_10905_length_251_cov_0.876404_g10805_i0 PRJEB76780 10905 251 0.876404 2.19977404 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 279 9.58e-71   NTclustered gi|27734360|gb|AY099135.1| 188952 g10805 i0 86.905 219.466135458167 252 30 99 1 1 249 346 95 Cercomonas edax isolate pub7 polyubiquitin gene, partial cds blastn 55086 279 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas edax
7791030 7791030 PRJEB76780_P_NODE_3207_length_456_cov_1.817232_g3107_i0 PRJEB76780 3207 456 1.817232 8.28657792 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 263 1.88e-65   NTclustered gi|695437469|ref|XM_009533931.1| 67593 g3107 i0 80.056 16.9978070175439 356 69 78 2 21 375 562 916 Phytophthora sojae hypothetical protein mRNA blastn 7751 263 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
12475364 12475364 PRJEB76780_P_NODE_7430_length_296_cov_1.748879_g7330_i0 PRJEB76780 7430 296 1.748879 5.17668184 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 196 1.2e-45   NTclustered gi|85822972|gb|DQ356652.1| 87106 g7330 i0 83.333 82.4527027027027 216 32 72 4 11 224 481 268 Thraustochytrium striatum elongation factor 1-alpha gene, partial cds blastn 24406 196 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Thraustochytrium Thraustochytrium striatum
14167075 14167075 PRJEB76780_P_NODE_10292_length_253_cov_0.866667_g10192_i0 PRJEB76780 10292 253 0.866667 2.19266751 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.37e-4   NTclustered gi|820696962|tpe|LN714494.1| 432359 g10192 i0 90.909 2.22134387351779 44 4 17 0 32 75 1619412 1619369 TPA_asm: Toxoplasma gondii VEG, chromosome chrV, complete genome blastn 562 60.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
14167114 14167114 PRJEB76780_P_NODE_1872_length_607_cov_7.205993_g1773_i0 PRJEB76780 1872 607 7.205993 43.74037751 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 392 3.119999999999999e-104   NTclustered gi|294933094|ref|XM_002780549.1| 423536 g1773 i0 81.876 32.668863261944 469 81 77 4 125 591 128 594 Perkinsus marinus ATCC 50983 40S ribosomal protein S5, putative, mRNA blastn 19830 392 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
18848131 18848131 PRJEB76780_P_NODE_2035_length_582_cov_3.772102_g1936_i0 PRJEB76780 2035 582 3.772102 21.95363364 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 219 5.36e-52   NTclustered gi|223047900|gb|FJ032683.1| 329655 g1936 i0 86.634 45.2714776632302 202 21 51 6 1 199 2218 2416 Uncultured marine Polycystinea clone Ma_1A27 28S ribosomal RNA gene, partial sequence blastn 26348 219 1 Eukaryota Sar     Polycystinea       uncultured marine Polycystinea
20539702 20539702 PRJEB76780_P_NODE_2977_length_476_cov_1.156328_g2877_i0 PRJEB76780 2977 476 1.156328 5.50412128 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 664 0   NTclustered gi|88792583|gb|DQ386164.1| 372086 g2877 i0 91.983 97.8655462184874 474 36 99 2 1 473 1579 2051 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 46584 664 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
21815536 21815536 PRJEB76780_P_NODE_9458_length_264_cov_1.481675_g9358_i0 PRJEB76780 9458 264 1.481675 3.911622 Plasmodium berghei 5821 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|1843423058|dbj|LC541869.1| 5823 g9358 i0 100 0.113636363636364 30 0 11 0 25 54 51179 51150 Plasmodium berghei ANKA chromosome 1 telomere region, partial sequence blastn 30 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
23090680 23090680 PRJEB76780_P_NODE_12839_length_244_cov_0.912281_g12739_i0 PRJEB76780 12839 244 0.912281 2.22596564 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.022   NTclustered gi|2795624578|ref|XM_068066319.1| 483139 g12739 i0 100 0.114754098360656 28 0 11 0 113 140 3076 3103 Cystoisospora suis transmembrane (CSUI_006155), mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;