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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJEB7614" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 15 ✖

bioproject 1

  • PRJEB7614 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23948867 23948867 PRJEB7614_P_NODE_3519_length_213_cov_1043.195652_g3452_i0 PRJEB7614 3519 213 1043.195652 2222.00673876 Chlorophyta 3041 Plants Plants 67.6 6.69e-7   NTclustered gi|6119987|gb|AF183447.1| 3109 g3452 i0 97.436 21.4131455399061 39 1 18 0 106 144 1370 1408 Ankistrodesmus stipitatus culture SAG:202-5 strain SAG 202-5 28S ribosomal RNA gene, partial sequence blastn 4561 67.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Ankistrodesmus Ankistrodesmus stipitatus
25616358 25616358 PRJEB7614a_S_NODE_123697_length_163_cov_10.421875_g122493_i0 PRJEB7614 123697 163 10.421875 16.98765625 Trebouxia 13786 Plants Plants 302 1.22e-77   NTclustered gi|49781197|gb|AY648107.1| 283661 g122493 i0 100 100.177914110429 163 0 100 0 1 163 1411 1249 Trebouxia sp. Wei 22-c 26S ribosomal RNA gene, partial sequence blastn 16329 302 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. Wei 22-c
25616364 25616364 PRJEB7614a_S_NODE_38665_length_302_cov_32.453184_g37461_i0 PRJEB7614 38665 302 32.453184 98.00861568 Trebouxia 13786 Plants Plants 503 6.459999999999998e-138   NTclustered gi|2105086|emb|Z95380.1| 13787 g37461 i0 98.258 94.9072847682119 287 5 95 0 1 287 19 305 T.asymmetrica 26S rRNA gene blastn 28662 508 0.990157480314961 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia asymmetrica
25616365 25616365 PRJEB7614a_S_NODE_43329_length_288_cov_24.154150_g42125_i0 PRJEB7614 43329 288 24.15415 69.563952 Jaagichlorella 2304164 Plants Plants 505 1.7e-138   NTclustered gi|694226588|gb|KM116462.1| 31301 g42125 i0 100 94.65625 273 0 95 0 16 288 2744 2472 Heterochlorella luteoviridis strain SAG 2213 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 27261 505 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Jaagichlorella Jaagichlorella luteoviridis
25888335 25888335 PRJEB7614a_S_NODE_130475_length_157_cov_8.918033_g129271_i0 PRJEB7614 130475 157 8.918033 14.00131181 Trebouxia 13786 Plants Plants 279 5.46e-71   NTclustered gi|162134340|gb|EU123979.1| 160068 g129271 i0 98.726 150.006369426752 157 2 100 0 1 157 1200 1356 Trebouxia aggregata strain SAG 219-1d large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf210) and hypothetical protein (orf277) genes, complete cds; chloroplast blastn 23551 279 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
25933944 25933944 PRJEB7614b_S_NODE_5324_length_160_cov_3.240000_g5322_i0 PRJEB7614 5324 160 3.24 5.184 Sarcinofilum mucosum 141643 Plants Plants 206 9.63e-49   NTclustered gi|1197510887|ref|NC_034709.1| 141643 g5322 i0 93.478 117.04375 138 9 86 0 1 138 147770 147907 Trichosarcina mucosa culture SAG:4.90 chloroplast, complete genome blastn 18727 206 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulotrichales Sarcinofilaceae Sarcinofilum Sarcinofilum mucosum
26024660 26024660 PRJEB7614a_S_NODE_38652_length_302_cov_67.037453_g37448_i0 PRJEB7614 38652 302 67.037453 202.45310806 Jaagichlorella 2304164 Plants Plants 388 1.89e-103   NTclustered gi|1802907783|gb|MT006204.1| 2704669 g37448 i0 94.118 85.158940397351 255 15 84 0 1 255 3239 3493 Jaagichlorella nagensis strain FACHB-2415 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 25718 388 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Jaagichlorella Jaagichlorella nagensis
26024676 26024676 PRJEB7614b_S_NODE_1740_length_188_cov_10.843137_g1738_i0 PRJEB7614 1740 188 10.843137 20.38509756 Eukaryota 2759 Plants Plants 348 1.84e-91   NTclustered gi|1189013852|gb|MF034633.1| 43939 g1738 i0 100 99.9787234042553 188 0 100 0 1 188 883 696 Hazenia basiliensis strain ULVO-15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18796 348 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulotrichales Hazeniaceae Hazenia Hazenia basiliensis
26069939 26069939 PRJEB7614a_S_NODE_87749_length_201_cov_17.939759_g86545_i0 PRJEB7614 87749 201 17.939759 36.05891559 Polulichloris maxima 2704661 Plants Plants 326 9.33e-85   NTclustered gi|2473928686|ref|NC_072905.1| 2704661 g86545 i0 96.02 134.044776119403 201 7 99 1 1 200 126038 125838 Polulichloris maxima clone L123 chloroplast, complete genome blastn 26943 326 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Polulichloris Polulichloris maxima
26206192 26206192 PRJEB7614a_S_NODE_100998_length_185_cov_10.746667_g99794_i0 PRJEB7614 100998 185 10.746667 19.88133395 Chloroidium ellipsoideum 63676 Plants Plants 265 1.86e-66   NTclustered gi|535783|dbj|D17810.1|CHLLSURRNA 63676 g99794 i0 92.473 101.135135135135 186 12 100 2 1 185 3044 2860 Chlorella ellipsoidea gene for large subunit rRNA, with group-I self-splicing intron blastn 18710 265 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium ellipsoideum
26206198 26206198 PRJEB7614a_S_NODE_125790_length_162_cov_1.267717_g124586_i0 PRJEB7614 125790 162 1.267717 2.05370154 Polulichloris maxima 2704661 Plants Plants 270 3.4199999999999993e-68   NTclustered gi|2473928686|ref|NC_072905.1| 2704661 g124586 i0 96.894 60.7530864197531 161 5 99 0 2 162 126973 126813 Polulichloris maxima clone L123 chloroplast, complete genome blastn 9842 270 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Polulichloris Polulichloris maxima
26296584 26296584 PRJEB7614a_S_NODE_128926_length_159_cov_1.975806_g127722_i0 PRJEB7614 128926 159 1.975806 3.14153154 Polulichloris 2511083 Plants Plants 289 9.22e-74   NTclustered gi|745734040|gb|KM458311.1| 1301201 g127722 i0 99.371 105.213836477987 159 1 100 0 1 159 284 126 Uncultured Heterochlorella isolate OTU 00024 23S ribosomal RNA gene, partial sequence; plastid blastn 16729 289 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae       uncultured Heterochlorella
26296613 26296613 PRJEB7614e_S_NODE_1998_length_205_cov_1.629412_g1990_i0 PRJEB7614 1998 205 1.629412 3.3402946 Jaagichlorella 2304164 Plants Plants 296 7.49e-76   NTclustered gi|478437260|gb|KC470085.1| 445995 g1990 i0 92.683 92.4292682926829 205 15 100 0 1 205 3335 3131 Heveochlorella hainangensis strain SAG 2360 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 18948 296 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Jaagichlorella Jaagichlorella hainangensis
26342044 26342044 PRJEB7614b_S_NODE_1591_length_192_cov_2.808917_g1589_i0 PRJEB7614 1591 192 2.808917 5.39312064 Blidingia sp. DT1 2022611 Plants Plants 270 4.19e-68   NTclustered gi|1220117795|gb|KY401415.1| 2022611 g1589 i0 94.857 91.25 175 5 89 3 22 192 2349 2523 Blidingia sp. DT1 28S ribosomal RNA gene, partial sequence blastn 17520 270 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Blidingia Blidingia sp. DT1
26432631 26432631 PRJEB7614d_S_NODE_1327_length_204_cov_0.982249_g1289_i0 PRJEB7614 1327 204 0.982249 2.00378796 Trebouxia 13786 Plants Plants 331 2.04e-86   NTclustered gi|2105087|emb|Z95381.1| 53268 g1289 i0 99.451 89.171568627451 182 1 89 0 1 182 281 100 T.arboricola 26S rRNA gene blastn 18191 331 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia arboricola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;