RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJEB75230" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB75230 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1411218 1411218 PRJEB75230_P_NODE_169262_length_243_cov_0.905882_g169080_i0 PRJEB75230 169262 243 0.905882 2.20129326 uncultured Gemmataceae bacterium 1914239 Bacteria Bacteria 202 2.0599999999999995e-47   NTclustered gi|2874253853|emb|OY969909.1| 1914239 g169080 i0 82.114 15.7489711934156 246 34 99 7 1 241 6149874 6149634 MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 blastn 3827 202 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   uncultured Gemmataceae bacterium
2685941 2685941 PRJEB75230_P_NODE_112163_length_254_cov_2.558011_g111981_i0 PRJEB75230 112163 254 2.558011 6.49734794 uncultured Planctomycetaceae bacterium 100233 Bacteria Bacteria 346 9.45e-91   NTclustered gi|2874254106|emb|OY970189.1| 100233 g111981 i0 91.373 72.9645669291339 255 19 100 3 1 254 4318022 4317770 MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 blastn 18533 346 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   uncultured Planctomycetaceae bacterium
6514081 6514081 PRJEB75230_P_NODE_118426_length_251_cov_0.865169_g118244_i0 PRJEB75230 118426 251 0.865169 2.17157419 Singulisphaera acidiphila 466153 Bacteria Bacteria 291 4.43e-74   NTclustered gi|430012750|gb|CP003364.1| 886293 g118244 i0 87.903 1.88844621513944 248 29 99 1 1 248 2478872 2479118 Singulisphaera acidiphila DSM 18658, complete genome blastn 474 291 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Singulisphaera Singulisphaera acidiphila
14165465 14165465 PRJEB75230_P_NODE_30672_length_348_cov_0.800000_g30490_i0 PRJEB75230 30672 348 0.8 2.784 Planctellipticum variicoloris 3064265 Bacteria Bacteria 52.8 0.033   NTclustered gi|2557458921|gb|CP130886.1| 3064265 g30490 i0 100 0.0804597701149425 28 0 8 0 128 155 1474239 1474212 Planctellipticum variicoloris strain SH412 chromosome, complete genome blastn 28 52.8 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Planctellipticum Planctellipticum variicoloris
16713231 16713231 PRJEB75230_P_NODE_166014_length_243_cov_1.447059_g165832_i0 PRJEB75230 166014 243 1.447059 3.51635337 Urbifossiella limnaea 2528023 Bacteria Bacteria 217 7.34e-52   NTclustered gi|1712585314|gb|CP036273.1| 2528023 g165832 i0 84.545 7.04938271604938 220 32 90 2 25 243 7696284 7696502 Urbifossiella limnaea strain ETA_A1 chromosome, complete genome blastn 1713 217 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Urbifossiella Urbifossiella limnaea
16713832 16713832 PRJEB75230_P_NODE_39974_length_328_cov_1.207843_g39792_i0 PRJEB75230 39974 328 1.207843 3.96172504 Singulisphaera sp. Ch08 3120278 Bacteria Bacteria 379 1.25e-100   NTclustered gi|2732846650|gb|CP155447.1| 3120278 g39792 i0 87.879 60.9542682926829 330 31 99 7 2 328 2271817 2271494 Singulisphaera sp. Ch08 chromosome, complete genome blastn 19993 379 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Singulisphaera Singulisphaera sp. Ch08

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;