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contig_metadata

23 rows where analysis = "blastn", bioproject = "PRJEB75230" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 23 ✖

tax_clade 1

bioproject 1

  • PRJEB75230 · 23 ✖

analysis 1

  • blastn · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2686304 2686304 PRJEB75230_P_NODE_140363_length_248_cov_0.880000_g140181_i0 PRJEB75230 140363 248 0.88 2.1824 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 115 2.82e-21   NTclustered gi|673053728|ref|XM_008882603.1| 157072 g140181 i0 82.812 1.64112903225806 128 22 52 0 119 246 1490 1617 Aphanomyces invadans hypothetical protein mRNA blastn 407 115 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
3961997 3961997 PRJEB75230_P_NODE_111584_length_255_cov_1.269231_g111402_i0 PRJEB75230 111584 255 1.269231 3.23653905 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 121 6.259999999999999e-23   NTclustered gi|695408334|ref|XM_009526318.1| 67593 g111402 i0 87.5 1.27058823529412 104 13 41 0 97 200 1393 1496 Phytophthora sojae hypothetical protein partial mRNA blastn 324 121 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
3962137 3962137 PRJEB75230_P_NODE_121284_length_251_cov_0.865169_g121102_i0 PRJEB75230 121284 251 0.865169 2.17157419 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 78.7 3.75e-10   NTclustered gi|813180878|ref|XM_012350718.1| 695850 g121102 i0 95.918 0.195219123505976 49 1 19 1 155 202 654 606 Saprolegnia parasitica CBS 223.65 hypothetical protein partial mRNA blastn 49 78.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
3962572 3962572 PRJEB75230_P_NODE_156524_length_245_cov_0.895349_g156342_i0 PRJEB75230 156524 245 0.895349 2.19360505 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 163 9.79e-36   NTclustered gi|187424037|gb|EU652939.1| 67593 g156342 i0 79.253 52.6938775510204 241 44 97 6 4 241 611 848 Phytophthora sojae G protein alpha subunit (GPA1) gene, complete cds blastn 12910 163 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
3964042 3964042 PRJEB75230_P_NODE_844_length_1323_cov_3.839200_g749_i0 PRJEB75230 844 1323 3.8392 50.792616 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 872 0   NTclustered gi|695434305|ref|XM_009533098.1| 67593 g749 i0 79.157 88.3257747543462 1305 238 97 23 2 1286 1325 35 Phytophthora sojae hypothetical protein partial mRNA blastn 116855 872 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
6515537 6515537 PRJEB75230_P_NODE_50966_length_311_cov_0.970588_g50784_i0 PRJEB75230 50966 311 0.970588 3.01852868 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|669164015|ref|XM_008619348.1| 1156394 g50784 i0 94.444 0.385852090032154 36 2 12 0 46 81 328 363 Saprolegnia diclina VS20 hypothetical protein mRNA blastn 120 56.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
6516198 6516198 PRJEB75230_P_NODE_93506_length_268_cov_2.358974_g93324_i0 PRJEB75230 93506 268 2.358974 6.32205032 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 121 6.63e-23   NTclustered gi|669140187|ref|XM_008607440.1| 1156394 g93324 i0 94.805 7.17910447761194 77 4 29 0 32 108 1428 1504 Saprolegnia diclina VS20 ATP-binding cassette, subfamily F, member 2 mRNA blastn 1924 121 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
6516278 6516278 PRJEB75230_P_NODE_9966_length_472_cov_1.090226_g9784_i0 PRJEB75230 9966 472 1.090226 5.14586672 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 320 1.14e-82   NTclustered gi|2795026849|ref|XM_067926286.1| 4785 g9784 i0 80.282 9.10593220338983 426 82 90 2 41 465 305 729 Phytophthora cinnamomi succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial (IUM83_02375), partial mRNA blastn 4298 320 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
8648966 8648966 PRJEB75230_P_NODE_129627_length_249_cov_1.312500_g129445_i0 PRJEB75230 129627 249 1.3125 3.268125 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 215 2.72e-51   NTclustered gi|2795038971|ref|XM_067942088.1| 4785 g129445 i0 83.193 55.2771084337349 238 36 95 4 9 244 730 965 Phytophthora cinnamomi adenosylhomocysteinase (IUM83_17157), partial mRNA blastn 13764 215 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
9063097 9063097 PRJEB75230_P_NODE_109188_length_257_cov_1.141304_g109006_i0 PRJEB75230 109188 257 1.141304 2.93315128 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 62.1 3.88e-5   NTclustered gi|698785190|ref|XM_009827337.1| 112090 g109006 i0 100 1.80544747081712 33 0 13 0 18 50 1131 1099 Aphanomyces astaci hypothetical protein partial mRNA blastn 464 62.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
9064229 9064229 PRJEB75230_P_NODE_27568_length_356_cov_1.434629_g27386_i0 PRJEB75230 27568 356 1.434629 5.1072792400000004 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 243 1.86e-59   NTclustered gi|673015481|ref|XM_008863480.1| 157072 g27386 i0 83.083 49.7191011235955 266 45 75 0 20 285 106 371 Aphanomyces invadans 60S ribosomal protein L44 mRNA blastn 17700 243 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
10340951 10340951 PRJEB75230_P_NODE_8649_length_495_cov_2.976303_g8467_i0 PRJEB75230 8649 495 2.976303 14.73269985 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 243 2.6700000000000008e-59   NTclustered gi|698791735|ref|XM_009830598.1| 112090 g8467 i0 79.235 19.2585858585859 366 63 72 11 124 481 554 194 Aphanomyces astaci malate dehydrogenase, NAD-dependent mRNA blastn 9533 243 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
11615353 11615353 PRJEB75230_P_NODE_184930_length_237_cov_4.432927_g184748_i0 PRJEB75230 184930 237 4.432927 10.50603699 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 220 5.51e-53   NTclustered gi|675203540|ref|XM_008912407.1| 761204 g184748 i0 86.207 80.2616033755274 203 28 86 0 35 237 213 415 Phytophthora parasitica INRA-310 actin-1 mRNA blastn 19022 220 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
14165768 14165768 PRJEB75230_P_NODE_4932_length_620_cov_1.745887_g4751_i0 PRJEB75230 4932 620 1.745887 10.8244994 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 346 2.52e-90   NTclustered gi|2795021165|ref|XM_067935669.1| 4785 g4751 i0 78.664 69.3967741935484 539 101 86 10 90 620 1459 927 Phytophthora cinnamomi ATP synthase subunit beta, mitochondrial (IUM83_11126), partial mRNA blastn 43026 346 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
17574004 17574004 PRJEB75230_P_NODE_4274_length_661_cov_6.098639_g4098_i0 PRJEB75230 4274 661 6.098639 40.31200379 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 261 1e-64   NTclustered gi|189083887|gb|BT031403.1| 4784 g4098 i0 81.62 45.679273827534 321 53 48 6 214 531 459 142 Phytophthora capsici clone CBOT69-P12 mRNA sequence blastn 30194 261 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
17987977 17987977 PRJEB75230_P_NODE_155615_length_245_cov_0.895349_g155433_i0 PRJEB75230 155615 245 0.895349 2.19360505 Peronospora lata 3235042 SAR_Eukaryotes SAR_Eukaryotes 453 5.1900000000000006e-123   NTclustered gi|2214966176|gb|ON130195.1| 3235042 g155433 i0 100 101.375510204082 245 0 100 0 1 245 364 608 Peronospora sp. MM-2022f voucher RD1544 large subunit ribosomal RNA gene, partial sequence blastn 24837 453 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora lata
19263392 19263392 PRJEB75230_P_NODE_8456_length_499_cov_2.321596_g8274_i0 PRJEB75230 8456 499 2.321596 11.58476404 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 385 4.23e-102   NTclustered gi|2795027172|ref|XM_067926257.1| 4785 g8274 i0 80.754 85.5350701402806 504 87 100 6 1 499 772 1270 Phytophthora cinnamomi citrate (Si)-synthase, eukaryotic (IUM83_02347), partial mRNA blastn 42682 385 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
20122201 20122201 PRJEB75230_P_NODE_10056_length_470_cov_1.342569_g9874_i0 PRJEB75230 10056 470 1.342569 6.3100743 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 193 2.58e-44   NTclustered gi|301107266|ref|XM_002902670.1| 403677 g9874 i0 85.405 43.1510638297872 185 27 39 0 1 185 143 327 Phytophthora infestans T30-4 ubiquitin, putative (PITG_10193), partial mRNA blastn 20281 193 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
20538476 20538476 PRJEB75230_P_NODE_6297_length_560_cov_1.632444_g6115_i0 PRJEB75230 6297 560 1.632444 9.1416864 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 411 7.899999999999999e-110   NTclustered gi|695382442|ref|XM_009519107.1| 67593 g6115 i0 80.292 91.7732142857143 548 104 98 4 15 560 721 1266 Phytophthora sojae hypothetical protein partial mRNA blastn 51393 411 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
21813645 21813645 PRJEB75230_P_NODE_22078_length_375_cov_4.298013_g21896_i0 PRJEB75230 22078 375 4.298013 16.11754875 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 283 1.16e-71   NTclustered gi|695460853|ref|XM_009539792.1| 67593 g21896 i0 84.014 65.4106666666667 294 47 78 0 76 369 309 16 Phytophthora sojae hypothetical protein mRNA blastn 24529 283 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
22672775 22672775 PRJEB75230_P_NODE_1578_length_1030_cov_11.047022_g1444_i0 PRJEB75230 1578 1030 11.047022 113.7843266 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 195 1.64e-44   NTclustered gi|1470016579|gb|MG701996.1| 2065309 g1444 i0 81.435 24.8009708737864 237 44 23 0 668 904 388 624 Phytophthora taxon juncus isolate SCVWD615 cytochrome c oxidase subunit 2 (cox2) gene, partial cds; orf32 (orf32) gene, complete cds; and cytochrome c oxidase subunit 1 (cox1) gene, partial cds; mitochondrial blastn 25545 195 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora taxon juncus
23088011 23088011 PRJEB75230_P_NODE_134539_length_248_cov_2.640000_g134357_i0 PRJEB75230 134539 248 2.64 6.5472 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 165 2.76e-36   NTclustered gi|675213812|ref|XM_008917543.1| 761204 g134357 i0 78.947 46.8629032258064 247 48 99 4 1 245 277 521 Phytophthora parasitica INRA-310 heat shock protein 90-2 mRNA blastn 11622 165 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
24363191 24363191 PRJEB75230_P_NODE_5100_length_611_cov_3.163569_g4919_i0 PRJEB75230 5100 611 3.163569 19.32940659 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 361 8.859999999999999e-95   NTclustered gi|695406446|ref|XM_009525816.1| 67593 g4919 i0 80.04 78.240589198036 496 91 81 8 17 508 573 82 Phytophthora sojae hypothetical protein mRNA blastn 47805 361 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;