RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB75230" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB75230 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
136034 136034 PRJEB75230_P_NODE_130361_length_249_cov_0.875000_g130179_i0 PRJEB75230 130361 249 0.875 2.17875 Diadema antillarum 105358 Echinodermata other_Eukaryota 52.8 0.023   NTclustered gi|2919403878|ref|XM_071632303.1| 105358 g130179 i0 100 0.112449799196787 28 0 11 0 32 59 2616 2643 PREDICTED: Diadema antillarum uncharacterized protein (LOC139720973), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
1412421 1412421 PRJEB75230_P_NODE_8162_length_506_cov_0.928406_g7980_i0 PRJEB75230 8162 506 0.928406 4.69773436 Lytechinus pictus 7653 Echinodermata other_Eukaryota 52.8 0.049   NTclustered gi|2707398240|ref|XM_064104547.1| 7653 g7980 i0 100 0.0553359683794466 28 0 6 0 226 253 1272 1299 PREDICTED: Lytechinus pictus CD151 antigen-like (LOC129268882), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
16713177 16713177 PRJEB75230_P_NODE_161974_length_244_cov_0.900585_g161792_i0 PRJEB75230 161974 244 0.900585 2.1974274 Lytechinus pictus 7653 Echinodermata other_Eukaryota 56.5 0.002   NTclustered gi|2707401160|ref|XM_064113199.1| 7653 g161792 i0 94.595 1.13934426229508 37 1 15 1 73 108 4424 4460 PREDICTED: Lytechinus pictus endosomal/lysosomal proton channel TMEM175-like (LOC129281552), mRNA blastn 278 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;