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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJEB75230" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 15 ✖

tax_clade 1

bioproject 1

  • PRJEB75230 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1412140 1412140 PRJEB75230_P_NODE_6242_length_561_cov_14.157787_g6060_i0 PRJEB75230 6242 561 14.157787 79.42518507 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 255 3.93e-63   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g6060 i0 81.329 55.3529411764706 316 58 56 1 128 442 107 422 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 31053 255 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3964107 3964107 PRJEB75230_P_NODE_88664_length_272_cov_1.763819_g88482_i0 PRJEB75230 88664 272 1.763819 4.79758768 Platyamoeba placida 3454475 Discosea other_Eukaryota 385 2.17e-102   NTclustered gi|33946348|gb|AY294153.1| 197527 g88482 i0 92.251 100.003676470588 271 21 99 0 1 271 812 542 Platyamoeba placida actin mRNA, partial cds blastn 27201 385 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
5238562 5238562 PRJEB75230_P_NODE_123645_length_250_cov_1.299435_g123463_i0 PRJEB75230 123645 250 1.299435 3.2485875 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 206 1.6399999999999998e-48   NTclustered gi|470523596|ref|XM_004354991.1| 1257118 g123463 i0 84.541 50.748 207 32 83 0 1 207 207 1 Acanthamoeba castellanii str. Neff rasrelated protein Rab-7, putative (ACA1_346040), partial mRNA blastn 12687 206 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9064329 9064329 PRJEB75230_P_NODE_3308_length_745_cov_2.032738_g3141_i0 PRJEB75230 3308 745 2.032738 15.1438981 Platyamoeba placida 3454475 Discosea other_Eukaryota 933 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g3141 i0 89.262 97.938255033557 745 80 100 0 1 745 1049 305 Platyamoeba placida actin mRNA, partial cds blastn 72964 933 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
9064509 9064509 PRJEB75230_P_NODE_4348_length_656_cov_12.096055_g4171_i0 PRJEB75230 4348 656 12.096055 79.3501208 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 56.5 0.005   NTclustered gi|470378920|ref|XM_004333477.1| 1257118 g4171 i0 94.444 0.0548780487804878 36 2 5 0 93 128 78 43 Acanthamoeba castellanii str. Neff Actobindin, putative (ACA1_256510), partial mRNA blastn 36 56.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9064959 9064959 PRJEB75230_P_NODE_73008_length_286_cov_1.084507_g72826_i0 PRJEB75230 73008 286 1.084507 3.10169002 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 111 4.3e-20   NTclustered gi|470380148|ref|XM_004333613.1| 1257118 g72826 i0 83.74 0.43006993006993 123 14 42 5 18 137 567 686 Acanthamoeba castellanii str. Neff actin bundling protein (ACA1_260120), partial mRNA blastn 123 111 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9065208 9065208 PRJEB75230_P_NODE_89968_length_271_cov_1.555556_g89786_i0 PRJEB75230 89968 271 1.555556 4.21555676 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 211 3.87e-50   NTclustered gi|470406900|ref|XM_004335952.1| 1257118 g89786 i0 81.132 56.9889298892989 265 48 97 2 5 268 226 489 Acanthamoeba castellanii str. Neff ribosomal protein S4, putative (ACA1_365780), partial mRNA blastn 15444 211 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12475133 12475133 PRJEB75230_P_NODE_650_length_1467_cov_3.942611_g568_i0 PRJEB75230 650 1467 3.942611 57.83810337 Acanthamoeba 5754 Discosea other_Eukaryota 760 0   NTclustered gi|881634|gb|U29610.1|ACU29610 5755 g568 i0 79.342 37.4935241990457 1094 216 74 7 105 1193 1312 224 Acanthaoeba castellanii actin-related protein 3 Arp3 mRNA, complete cds blastn 55003 760 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12890715 12890715 PRJEB75230_P_NODE_3731_length_705_cov_14.590190_g3557_i0 PRJEB75230 3731 705 14.59019 102.8608395 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 379 2.84e-100   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g3557 i0 78.176 69.6510638297872 614 120 86 13 81 687 607 1 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 49104 379 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12890824 12890824 PRJEB75230_P_NODE_4531_length_645_cov_2.103147_g4353_i0 PRJEB75230 4531 645 2.103147 13.56529815 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 346 2.63e-90   NTclustered gi|470504026|ref|XM_004348289.1| 1257118 g4353 i0 79.079 63.5968992248062 521 95 80 12 4 517 572 59 Acanthamoeba castellanii str. Neff H(+)-transporting atpase family protein (ACA1_022710), partial mRNA blastn 41020 346 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12891603 12891603 PRJEB75230_P_NODE_991_length_1234_cov_6.360034_g885_i0 PRJEB75230 991 1234 6.360034 78.48281956 Vannella ebro 207334 Discosea other_Eukaryota 1369 0   NTclustered gi|33946344|gb|AY294151.1| 207334 g885 i0 88.642 88.4789303079417 1127 124 91 4 13 1137 13 1137 Vannella ebro actin mRNA, complete cds blastn 109183 1369 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella ebro
19262404 19262404 PRJEB75230_P_NODE_20496_length_382_cov_1.291262_g20314_i0 PRJEB75230 20496 382 1.291262 4.93262084 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 111 5.93e-20   NTclustered gi|470428251|ref|XM_004338026.1| 1257118 g20314 i0 76.812 0.541884816753927 207 43 54 3 123 328 708 506 Acanthamoeba castellanii str. Neff TolAlike protein (ACA1_224400), partial mRNA blastn 207 111 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19262518 19262518 PRJEB75230_P_NODE_26856_length_359_cov_0.860140_g26674_i0 PRJEB75230 26856 359 0.86014 3.0879026 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 440 6.209999999999997e-119   NTclustered gi|470484649|ref|XM_004344039.1| 1257118 g26674 i0 89.625 90.3899721448468 347 34 96 2 14 359 5757 5412 Acanthamoeba castellanii str. Neff PremRNA processing splicing factor 8, putative (ACA1_054320), partial mRNA blastn 32450 440 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20538987 20538987 PRJEB75230_P_NODE_96377_length_266_cov_1.569948_g96195_i0 PRJEB75230 96377 266 1.569948 4.17606168 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 165 2.99e-36   NTclustered gi|470431752|ref|XM_004338384.1| 1257118 g96195 i0 81.5 32.5263157894737 200 37 75 0 1 200 830 1029 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_320830), partial mRNA blastn 8652 165 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21812746 21812746 PRJEB75230_P_NODE_11998_length_443_cov_3.256757_g11816_i0 PRJEB75230 11998 443 3.256757 14.42743351 Acanthamoeba sp. 4b3 242128 Discosea other_Eukaryota 499 1.27e-136   NTclustered gi|1107480|emb|X87156.1| 242128 g11816 i0 88.152 227.067720090293 422 47 95 3 23 442 1862 2282 Acanthamoeba sp. 4b3 polyubiquitin gene blastn 100591 499 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp. 4b3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;