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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJEB75230" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB75230 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1410708 1410708 PRJEB75230_P_NODE_129762_length_249_cov_1.227273_g129580_i0 PRJEB75230 129762 249 1.227273 3.05590977 Synchytrium microbalum 1806994 Fungi Fungi 172 1.66e-38   NTclustered gi|1759146721|ref|XM_031168020.1| 1806994 g129580 i0 80.631 13.8393574297189 222 43 89 0 5 226 1849 2070 Synchytrium microbalum uncharacterized protein (SmJEL517_g02092), partial mRNA blastn 3446 172 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
3962362 3962362 PRJEB75230_P_NODE_140604_length_247_cov_2.597701_g140422_i0 PRJEB75230 140604 247 2.597701 6.41632147 Polychytrium aggregatum 110093 Fungi Fungi 172 1.64e-38   NTclustered gi|2432146242|ref|XM_053110900.1| 110093 g140422 i0 80.169 26.1862348178138 237 41 95 5 5 238 120 353 Polychytrium aggregatum uncharacterized protein (BJ171DRAFT_503834), mRNA blastn 6468 172 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
6514229 6514229 PRJEB75230_P_NODE_12986_length_432_cov_1.980501_g12804_i0 PRJEB75230 12986 432 1.980501 8.55576432 Polychytrium aggregatum 110093 Fungi Fungi 217 1.4e-51   NTclustered gi|2432147654|ref|XM_053111044.1| 110093 g12804 i0 85.377 58.599537037037 212 28 49 3 211 421 1024 1233 Polychytrium aggregatum Enolase, C-terminal TIM barrel domain-containing protein (BJ171DRAFT_505639), mRNA blastn 25315 217 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
9064075 9064075 PRJEB75230_P_NODE_185428_length_232_cov_2.905660_g185246_i0 PRJEB75230 185428 232 2.90566 6.7411312 Polychytrium aggregatum 110093 Fungi Fungi 100 7.3e-17   NTclustered gi|2432130198|ref|XM_053115874.1| 110093 g185246 i0 92.754 2.62068965517241 69 5 30 0 4 72 354 286 Polychytrium aggregatum P-loop containing nucleoside triphosphate hydrolase protein (BJ171DRAFT_7386), mRNA blastn 608 100 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
9923998 9923998 PRJEB75230_P_NODE_185708_length_229_cov_14.506410_g185526_i0 PRJEB75230 185708 229 14.50641 33.2196789 Fungi 4751 Fungi Fungi 121 5.519999999999999e-23   NTclustered gi|2432138713|ref|XM_053107478.1| 110093 g185526 i0 84.252 11.6113537117904 127 16 55 3 82 206 148 24 Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA blastn 2659 122 0.991803278688525 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
11199555 11199555 PRJEB75230_P_NODE_8749_length_493_cov_1.385714_g8567_i0 PRJEB75230 8749 493 1.385714 6.83157002 Opisthokonta 33154 Fungi Fungi 460 6.749999999999998e-125   NTclustered gi|2432171462|ref|XM_053112561.1| 110093 g8567 i0 84.388 94.3326572008114 474 68 96 6 23 493 1522 1052 Polychytrium aggregatum heat shock protein 90 kDa (BJ171DRAFT_524257), mRNA blastn 46506 464 0.991379310344828 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
19262814 19262814 PRJEB75230_P_NODE_4556_length_643_cov_3.121053_g4378_i0 PRJEB75230 4556 643 3.121053 20.06837079 Polychytrium aggregatum 110093 Fungi Fungi 235 5.909999999999999e-57   NTclustered gi|2432145256|ref|XM_053110808.1| 110093 g4378 i0 82.079 47.4914463452566 279 46 43 4 367 643 1800 1524 Polychytrium aggregatum hsp71-like protein (BJ171DRAFT_502900), mRNA blastn 30537 235 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
22672891 22672891 PRJEB75230_P_NODE_2378_length_864_cov_3.345133_g2230_i0 PRJEB75230 2378 864 3.345133 28.90194912 Fungi 4751 Fungi Fungi 440 1.59e-118   NTclustered gi|2432132579|ref|XM_053106383.1| 110093 g2230 i0 79.589 61.5069444444444 632 115 72 14 209 833 1761 1137 Polychytrium aggregatum heat shock protein 70 family (BJ171DRAFT_212372), mRNA blastn 53142 440 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
23087631 23087631 PRJEB75230_P_NODE_108219_length_257_cov_1.673913_g108037_i0 PRJEB75230 108219 257 1.673913 4.30195641 Polychytrium aggregatum 110093 Fungi Fungi 195 3.67e-45   NTclustered gi|2432170888|ref|XM_053112523.1| 110093 g108037 i0 80.876 26.8287937743191 251 44 97 3 1 249 309 61 Polychytrium aggregatum putative 40S ribosomal protein S3 (BJ171DRAFT_522887), mRNA blastn 6895 195 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
23088712 23088712 PRJEB75230_P_NODE_184659_length_240_cov_3.407186_g184477_i0 PRJEB75230 184659 240 3.407186 8.1772464 Polychytrium aggregatum 110093 Fungi Fungi 147 9.63e-31   NTclustered gi|2432143306|ref|XM_053110608.1| 110093 g184477 i0 87.903 16.0666666666667 124 15 52 0 117 240 168 291 Polychytrium aggregatum putative 40S ribosomal protein RPS14 (BJ171DRAFT_500769), mRNA blastn 3856 147 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;