contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJEB75230" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 136076 | 136076 | PRJEB75230_P_NODE_134141_length_249_cov_0.875000_g133959_i0 | PRJEB75230 | 134141 | 249 | 0.875 | 2.17875 | Poseidonibacter lekithochrous | 1904463 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|1850313845|gb|CP054052.1| | 1904463 | g133959 | i0 | 100 | 0.112449799196787 | 28 | 0 | 11 | 0 | 96 | 123 | 1576212 | 1576239 | Poseidonibacter lekithochrous strain DSM 100870 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Poseidonibacter | Poseidonibacter lekithochrous | ||
| 136431 | 136431 | PRJEB75230_P_NODE_160501_length_244_cov_1.093567_g160319_i0 | PRJEB75230 | 160501 | 244 | 1.093567 | 2.66830348 | Campylobacter pinnipediorum | 1965231 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|1153130550|gb|CP012546.1| | 1660067 | g160319 | i0 | 100 | 0.114754098360656 | 28 | 0 | 11 | 0 | 44 | 71 | 63483 | 63510 | Campylobacter pinnipediorum subsp. pinnipediorum strain RM17260 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter pinnipediorum | ||
| 2270979 | 2270979 | PRJEB75230_P_NODE_150702_length_246_cov_0.890173_g150520_i0 | PRJEB75230 | 150702 | 246 | 0.890173 | 2.18982558 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 73.1 | 1.71e-8 | NTclustered | gi|817151433|gb|CP011308.1| | 206403 | g150520 | i0 | 95.652 | 34.4308943089431 | 46 | 1 | 18 | 1 | 202 | 246 | 645330 | 645285 | Sulfurovum lithotrophicum strain ATCC BAA-797, complete genome | blastn | 8470 | 73.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurovaceae | Sulfurovum | Sulfurovum lithotrophicum | ||
| 3964207 | 3964207 | PRJEB75230_P_NODE_94844_length_267_cov_1.773196_g94662_i0 | PRJEB75230 | 94844 | 267 | 1.773196 | 4.73443332 | Campylobacter sp. CN_NE2 | 2984146 | Bacteria | Bacteria | 424 | 4.49e-114 | NTclustered | gi|2427059240|gb|CP115608.1| | 2984146 | g94662 | i0 | 95.221 | 219.505617977528 | 272 | 6 | 100 | 5 | 1 | 267 | 117615 | 117346 | Campylobacter sp. CN_NE2 strain Cn NE2 chromosome | blastn | 58608 | 424 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. CN_NE2 | ||
| 10340999 | 10340999 | PRJEB75230_P_NODE_90369_length_271_cov_1.297980_g90187_i0 | PRJEB75230 | 90369 | 271 | 1.29798 | 3.5175258 | Aliarcobacter cryaerophilus | 28198 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|1679706893|gb|CP021072.1| | 1032070 | g90187 | i0 | 100 | 0.206642066420664 | 28 | 0 | 10 | 0 | 167 | 194 | 1291375 | 1291402 | Arcobacter cryaerophilus ATCC 43158 strain LMG 9904 genome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter cryaerophilus | ||
| 11616125 | 11616125 | PRJEB75230_P_NODE_63890_length_295_cov_1.301802_g63708_i0 | PRJEB75230 | 63890 | 295 | 1.301802 | 3.8403159 | Arcobacter sp. L | 944547 | Bacteria | Bacteria | 52.8 | 0.027 | NTclustered | gi|345470425|dbj|AP012048.1| | 944547 | g63708 | i0 | 100 | 0.0949152542372881 | 28 | 0 | 9 | 0 | 265 | 292 | 929334 | 929361 | Arcobacter sp. L DNA, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter sp. L | ||
| 12890990 | 12890990 | PRJEB75230_P_NODE_56491_length_304_cov_1.000000_g56309_i0 | PRJEB75230 | 56491 | 304 | 1 | 3.04 | Arcobacter ellisii | 913109 | Bacteria | Bacteria | 54.7 | 0.008 | NTclustered | gi|1474793334|gb|CP032097.1| | 913109 | g56309 | i0 | 94.444 | 0.118421052631579 | 36 | 0 | 12 | 2 | 151 | 186 | 1163871 | 1163838 | Arcobacter ellisii strain LMG 26155 chromosome, complete genome | blastn | 36 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter ellisii | ||
| 15438405 | 15438405 | PRJEB75230_P_NODE_119873_length_251_cov_0.865169_g119691_i0 | PRJEB75230 | 119873 | 251 | 0.865169 | 2.17157419 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 121 | 6.149999999999999e-23 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g119691 | i0 | 92.771 | 0.661354581673307 | 83 | 6 | 33 | 0 | 1 | 83 | 401414 | 401332 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 166 | 121 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 23087757 | 23087757 | PRJEB75230_P_NODE_116299_length_252_cov_1.050279_g116117_i0 | PRJEB75230 | 116299 | 252 | 1.050279 | 2.64670308 | Campylobacter showae | 204 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|1622747600|gb|CP012544.1| | 204 | g116117 | i0 | 92.105 | 0.301587301587302 | 38 | 2 | 15 | 1 | 65 | 102 | 950103 | 950139 | Campylobacter showae strain ATCC 51146 chromosome, complete genome | blastn | 76 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;