RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB75227" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB75227 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16712333 16712333 PRJEB75227_P_NODE_4294_length_343_cov_1.774074_g4123_i0 PRJEB75227 4294 343 1.774074 6.08507382 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 196 1.42e-45   NTclustered gi|1369885|gb|L78441.1|SCM14332R 6183 g4123 i0 86.188 6.02915451895044 181 25 53 0 163 343 1 181 Schistosoma mansoni 14-3-3-2 mRNA, 3' end of cds blastn 2068 196 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
16712355 16712355 PRJEB75227_P_NODE_7874_length_257_cov_1.467391_g7703_i0 PRJEB75227 7874 257 1.467391 3.77119487 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 361 3.42e-95   NTclustered gi|68479954|gb|DQ076149.1| 6182 g7703 i0 92.157 0.992217898832685 255 20 99 0 2 256 294 40 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 255 361 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;