contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJEB75227" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135637 | 135637 | PRJEB75227_P_NODE_3481_length_387_cov_1.238854_g3310_i0 | PRJEB75227 | 3481 | 387 | 1.238854 | 4.79436498 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 401 | 3.189999999999999e-107 | NTclustered | gi|695448559|ref|XM_009536718.1| | 67593 | g3310 | i0 | 85.751 | 93.147286821705407 | 386 | 47 | 99 | 6 | 3 | 387 | 976 | 598 | Phytophthora sojae ATP synthase beta subunit mRNA | blastn | 36048 | 401 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 3961799 | 3961799 | PRJEB75227_P_NODE_7204_length_268_cov_1.600000_g7033_i0 | PRJEB75227 | 7204 | 268 | 1.6 | 4.288 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 152 | 2.3499999999999998e-32 | NTclustered | gi|695407986|ref|XM_009526229.1| | 67593 | g7033 | i0 | 80.193 | 23.7089552238806 | 207 | 37 | 76 | 4 | 64 | 268 | 677 | 473 | Phytophthora sojae hypothetical protein partial mRNA | blastn | 6354 | 152 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 7788013 | 7788013 | PRJEB75227_P_NODE_11827_length_242_cov_0.923077_g11656_i0 | PRJEB75227 | 11827 | 242 | 0.923077 | 2.23384634 | Phytophthora ramorum | 164328 | SAR_Eukaryotes | SAR_Eukaryotes | 287 | 5.49e-73 | NTclustered | gi|2794889416|ref|XM_067886769.1| | 164328 | g11656 | i0 | 88.017 | 94.7933884297521 | 242 | 29 | 100 | 0 | 1 | 242 | 1077 | 836 | Phytophthora ramorum ATP-dependent RNA helicase eIF4A (KRP23_2082), partial mRNA | blastn | 22940 | 287 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora ramorum | ||
| 23087427 | 23087427 | PRJEB75227_P_NODE_1939_length_557_cov_4.407025_g1768_i0 | PRJEB75227 | 1939 | 557 | 4.407025 | 24.54712925 | Hyaloperonospora parasitica | 123356 | SAR_Eukaryotes | SAR_Eukaryotes | 54.7 | 0.015 | NTclustered | gi|170285697|emb|CU672270.3| | 123356 | g1768 | i0 | 100 | 0.052064631956912 | 29 | 0 | 5 | 0 | 89 | 117 | 1761 | 1789 | H.parasitica DNA sequence from clone HpEmoy2-20J10, complete sequence | blastn | 29 | 54.7 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Hyaloperonospora | Hyaloperonospora parasitica | ||
| 24361472 | 24361472 | PRJEB75227_P_NODE_7920_length_256_cov_1.661202_g7749_i0 | PRJEB75227 | 7920 | 256 | 1.661202 | 4.25267712 | Phytophthora nicotianae | 4792 | SAR_Eukaryotes | SAR_Eukaryotes | 250 | 7.69e-62 | NTclustered | gi|38489929|gb|AY456093.1| | 4792 | g7749 | i0 | 87.85 | 81.17578125 | 214 | 24 | 83 | 2 | 1 | 213 | 2152 | 2364 | Phytophthora nicotianae heat shock protein 70 (Hsp70a) gene, complete cds | blastn | 20781 | 250 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora nicotianae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;