RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJEB75227" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 9 ✖

bioproject 1

  • PRJEB75227 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5238153 5238153 PRJEB75227_P_NODE_10605_length_245_cov_1.581395_g10434_i0 PRJEB75227 10605 245 1.581395 3.87441775 Potexvirus trifolii 3433859 Viruses Viruses 398 2.47e-106   NTclustered gi|2792601926|gb|PQ162444.1| 12188 g10434 i0 95.918 19.9918367346939 245 10 100 0 1 245 1096 852 White clover mosaic virus isolate DSMZ PV-1407, complete genome blastn 4898 398 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
6513785 6513785 PRJEB75227_P_NODE_7946_length_256_cov_1.278689_g7775_i0 PRJEB75227 7946 256 1.278689 3.27344384 Potexvirus trifolii 3433859 Viruses Viruses 399 7.209999999999998e-107   NTclustered gi|2792601926|gb|PQ162444.1| 12188 g7775 i0 94.902 24.31640625 255 13 99 0 2 256 4852 5106 White clover mosaic virus isolate DSMZ PV-1407, complete genome blastn 6225 399 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
9062956 9062956 PRJEB75227_P_NODE_8148_length_253_cov_1.300000_g7977_i0 PRJEB75227 8148 253 1.3 3.289 Potexvirus trifolii 3433859 Viruses Viruses 424 4.22e-114   NTclustered gi|2792601926|gb|PQ162444.1| 12188 g7977 i0 96.838 19.9288537549407 253 8 100 0 1 253 3185 2933 White clover mosaic virus isolate DSMZ PV-1407, complete genome blastn 5042 424 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
11614163 11614163 PRJEB75227_P_NODE_7470_length_264_cov_1.403141_g7299_i0 PRJEB75227 7470 264 1.403141 3.70429224 Sopafab virus 3131770 Viruses Viruses 424 4.44e-114   NTclustered gi|2717323354|gb|PP174071.1| 3131770 g7299 i0 98.739 100.80303030303 238 3 90 0 27 264 310 73 MAG: Sopafab virus isolate SP1C_k141_220867 genomic sequence blastn 26612 424 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Sopafab virus
12889246 12889246 PRJEB75227_P_NODE_9831_length_248_cov_0.891429_g9660_i0 PRJEB75227 9831 248 0.891429 2.21074392 Potexvirus trifolii 3433859 Viruses Viruses 407 4.16e-109   NTclustered gi|2792601926|gb|PQ162444.1| 12188 g9660 i0 96.356 16.9516129032258 247 9 99 0 1 247 3349 3595 White clover mosaic virus isolate DSMZ PV-1407, complete genome blastn 4204 407 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
14164010 14164010 PRJEB75227_P_NODE_3412_length_393_cov_0.971875_g3241_i0 PRJEB75227 3412 393 0.971875 3.81946875 Potexvirus trifolii 3433859 Viruses Viruses 676 0   NTclustered gi|2792601926|gb|PQ162444.1| 12188 g3241 i0 97.71 35.0661577608142 393 9 100 0 1 393 5767 5375 White clover mosaic virus isolate DSMZ PV-1407, complete genome blastn 13781 676 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
19261218 19261218 PRJEB75227_P_NODE_4776_length_323_cov_1.228000_g4605_i0 PRJEB75227 4776 323 1.228 3.96644 Potexvirus trifolii 3433859 Viruses Viruses 542 1.48e-149   NTclustered gi|2792601926|gb|PQ162444.1| 12188 g4605 i0 96.904 20.8049535603715 323 10 100 0 1 323 2546 2224 White clover mosaic virus isolate DSMZ PV-1407, complete genome blastn 6720 542 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
20536550 20536550 PRJEB75227_P_NODE_2837_length_440_cov_1.700272_g2666_i0 PRJEB75227 2837 440 1.700272 7.4811968 Potexvirus trifolii 3433859 Viruses Viruses 664 0   NTclustered gi|2792601926|gb|PQ162444.1| 12188 g2666 i0 93.864 17.1977272727273 440 27 100 0 1 440 4796 4357 White clover mosaic virus isolate DSMZ PV-1407, complete genome blastn 7567 664 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
23087450 23087450 PRJEB75227_P_NODE_4559_length_332_cov_1.528958_g4388_i0 PRJEB75227 4559 332 1.528958 5.07614056 Potexvirus trifolii 3433859 Viruses Viruses 499 9.29e-137   NTclustered gi|2792601926|gb|PQ162444.1| 12188 g4388 i0 93.939 10.8734939759036 330 20 99 0 3 332 1658 1329 White clover mosaic virus isolate DSMZ PV-1407, complete genome blastn 3610 499 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;