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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJEB75227" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Sar · 14 ✖

bioproject 1

  • PRJEB75227 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
135637 135637 PRJEB75227_P_NODE_3481_length_387_cov_1.238854_g3310_i0 PRJEB75227 3481 387 1.238854 4.79436498 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 401 3.189999999999999e-107   NTclustered gi|695448559|ref|XM_009536718.1| 67593 g3310 i0 85.751 93.147286821705407 386 47 99 6 3 387 976 598 Phytophthora sojae ATP synthase beta subunit mRNA blastn 36048 401 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
3961779 3961779 PRJEB75227_P_NODE_4964_length_315_cov_1.954545_g4793_i0 PRJEB75227 4964 315 1.954545 6.15681675 Spumella-like flagellate JBC/S23 293195 SAR_Eukaryotes SAR_Eukaryotes 481 3.17e-131   NTclustered gi|161015622|gb|EF577221.1| 293195 g4793 i0 94.286 100.368253968254 315 17 100 1 1 315 173 486 Spumella-like flagellate JBC/S23 alpha-tubulin-like gene, partial sequence blastn 31616 481 1 Eukaryota Sar     Chrysophyceae       Spumella-like flagellate JBC/S23
3961799 3961799 PRJEB75227_P_NODE_7204_length_268_cov_1.600000_g7033_i0 PRJEB75227 7204 268 1.6 4.288 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 152 2.3499999999999998e-32   NTclustered gi|695407986|ref|XM_009526229.1| 67593 g7033 i0 80.193 23.7089552238806 207 37 76 4 64 268 677 473 Phytophthora sojae hypothetical protein partial mRNA blastn 6354 152 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
4823709 4823709 PRJEB75227_P_NODE_4044_length_354_cov_5.288256_g3873_i0 PRJEB75227 4044 354 5.288256 18.72042624 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 121 9.05e-23   NTclustered gi|194245783|gb|EU828456.1| 5888 g3873 i0 78.462 42.8728813559322 195 35 54 6 165 354 3146 2954 Paramecium tetraurelia large subunit ribosomal RNA gene, complete sequence blastn 15177 121 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
6098837 6098837 PRJEB75227_P_NODE_5025_length_313_cov_1.258333_g4854_i0 PRJEB75227 5025 313 1.258333 3.93858229 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 540 5.13e-149   NTclustered gi|1202135013|gb|KY476314.1| 151077 g4854 i0 97.771 96.14696485623 314 5 100 2 1 313 13 325 Chilodonella uncinata 18S ribosomal RNA gene, partial sequence blastn 30094 540 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
7788013 7788013 PRJEB75227_P_NODE_11827_length_242_cov_0.923077_g11656_i0 PRJEB75227 11827 242 0.923077 2.23384634 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 287 5.49e-73   NTclustered gi|2794889416|ref|XM_067886769.1| 164328 g11656 i0 88.017 94.7933884297521 242 29 100 0 1 242 1077 836 Phytophthora ramorum ATP-dependent RNA helicase eIF4A (KRP23_2082), partial mRNA blastn 22940 287 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
7788061 7788061 PRJEB75227_P_NODE_8787_length_251_cov_0.876404_g8616_i0 PRJEB75227 8787 251 0.876404 2.19977404 Suigetsumonas clinomigrationis 1527026 SAR_Eukaryotes SAR_Eukaryotes 145 3.65e-30   NTclustered gi|2048770153|gb|MT042875.1| 1527026 g8616 i0 80.311 7.0597609561753 193 36 76 2 1 192 96 287 Suigetsumonas clinomigrationis strain HFCC1406 40S ribosomal protein S23 mRNA, complete cds blastn 1772 145 1 Eukaryota Sar     Bigyra Placidida   Suigetsumonas Suigetsumonas clinomigrationis
7788062 7788062 PRJEB75227_P_NODE_8967_length_251_cov_0.876404_g8796_i0 PRJEB75227 8967 251 0.876404 2.19977404 Aureococcus anophagefferens 44056 SAR_Eukaryotes SAR_Eukaryotes 200 7.679999999999999e-47   NTclustered gi|676392404|ref|XM_009041232.1| 44056 g8796 i0 84.653 1.8207171314741 202 29 80 2 51 251 1981 1781 Aureococcus anophagefferens hypothetical protein mRNA blastn 457 200 1 Eukaryota Sar     Pelagophyceae Pelagomonadales Pelagomonadaceae Aureococcus Aureococcus anophagefferens
14164003 14164003 PRJEB75227_P_NODE_1912_length_563_cov_2.159184_g1741_i0 PRJEB75227 1912 563 2.159184 12.15620592 Undaria pinnatifida 74381 SAR_Eukaryotes SAR_Eukaryotes 401 4.779999999999999e-107   NTclustered gi|341575468|gb|HQ906853.1| 74381 g1741 i0 79.821 88.449378330373 560 105 99 8 2 557 426 981 Undaria pinnatifida S-adenosyl-methionine synthetase gene, complete cds blastn 49797 401 1 Eukaryota Sar     Phaeophyceae Laminariales Alariaceae Undaria Undaria pinnatifida
17987195 17987195 PRJEB75227_P_NODE_10755_length_245_cov_0.906977_g10584_i0 PRJEB75227 10755 245 0.906977 2.22209365 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 368 1.93e-97   NTclustered gi|300521444|gb|GQ377690.1| 151077 g10584 i0 94.538 0.971428571428571 238 13 97 0 8 245 452 215 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 238 368 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
21812445 21812445 PRJEB75227_P_NODE_6638_length_278_cov_1.073171_g6467_i0 PRJEB75227 6638 278 1.073171 2.98341538 Caryotricha sinica 2652903 SAR_Eukaryotes SAR_Eukaryotes 122 1.92e-23   NTclustered gi|2328859121|gb|OP828526.1| 2652903 g6467 i0 97.222 26.8345323741007 72 2 26 0 207 278 982 911 Caryotricha sinica isolate LCY2018041109 large subunit ribosomal RNA gene, partial sequence blastn 7460 122 1 Eukaryota Sar   Ciliophora Spirotrichea Kiitrichida Kiitrichidae Caryotricha Caryotricha sinica
23087427 23087427 PRJEB75227_P_NODE_1939_length_557_cov_4.407025_g1768_i0 PRJEB75227 1939 557 4.407025 24.54712925 Hyaloperonospora parasitica 123356 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.015   NTclustered gi|170285697|emb|CU672270.3| 123356 g1768 i0 100 0.052064631956912 29 0 5 0 89 117 1761 1789 H.parasitica DNA sequence from clone HpEmoy2-20J10, complete sequence blastn 29 54.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora parasitica
23087472 23087472 PRJEB75227_P_NODE_6739_length_276_cov_1.305419_g6568_i0 PRJEB75227 6739 276 1.305419 3.60295644 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 270 6.4399999999999996e-68   NTclustered gi|657012465|gb|KF302574.1| 2850 g6568 i0 89.302 30.25 215 23 78 0 1 215 215 1 Phaeodactylum tricornutum clone C567 ribosomal protein mRNA, partial cds blastn 8349 270 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
24361472 24361472 PRJEB75227_P_NODE_7920_length_256_cov_1.661202_g7749_i0 PRJEB75227 7920 256 1.661202 4.25267712 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 250 7.69e-62   NTclustered gi|38489929|gb|AY456093.1| 4792 g7749 i0 87.85 81.17578125 214 24 83 2 1 213 2152 2364 Phytophthora nicotianae heat shock protein 70 (Hsp70a) gene, complete cds blastn 20781 250 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;