RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB75017" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB75017 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9062596 9062596 PRJEB75017_P_NODE_12428_length_265_cov_1.515625_g12299_i0 PRJEB75017 12428 265 1.515625 4.01640625 Amphimedon queenslandica 400682 Porifera other_Eukaryota 52.8 0.024   NTclustered gi|1133490048|ref|XM_011410244.2| 400682 g12299 i0 100 0.211320754716981 28 0 11 0 23 50 1489 1516 PREDICTED: Amphimedon queenslandica uncharacterized protein C1orf228-like (LOC100635372), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica
12888915 12888915 PRJEB75017_P_NODE_17611_length_244_cov_0.912281_g17482_i0 PRJEB75017 17611 244 0.912281 2.22596564 Dysidea cf. arenaria JV-2020 2742473 Porifera other_Eukaryota 165 2.71e-36   NTclustered gi|1849571333|gb|MT571644.1| 2742473 g17482 i0 80 13.5819672131148 235 38 95 7 2 232 535 764 Dysidea cf. arenaria JV-2020 voucher UF 3724 cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial blastn 3314 165 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea cf. arenaria JV-2020

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;