contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJEB75017" and tax_phylum = "Mollusca"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3546133 | 3546133 | PRJEB75017_P_NODE_18783_length_231_cov_2.443038_g18654_i0 | PRJEB75017 | 18783 | 231 | 2.443038 | 5.64341778 | Ctena | 102298 | Mollusca | Mollusca | 130 | 9.27e-26 | NTclustered | gi|2125838800|gb|OL183269.1| | 881210 | g18654 | i0 | 91.489 | 8.91341991341991 | 94 | 8 | 41 | 0 | 138 | 231 | 4042 | 4135 | Ctena bella voucher UF437018 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 2059 | 130 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Bivalvia | Lucinida | Lucinidae | Ctena | Ctena bella | |
| 3961513 | 3961513 | PRJEB75017_P_NODE_4464_length_414_cov_3.143695_g4335_i0 | PRJEB75017 | 4464 | 414 | 3.143695 | 13.0148973 | Physella acuta | 109671 | Mollusca | Mollusca | 645 | 1.4399999999999993e-180 | NTclustered | gi|2572452079|ref|XR_009385380.1| | 109671 | g4335 | i0 | 94.737 | 4.7536231884058 | 418 | 16 | 100 | 6 | 1 | 414 | 3333 | 3748 | PREDICTED: Physella acuta large subunit ribosomal RNA (LOC131933988), rRNA | blastn | 1968 | 645 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Physidae | Physella | Physella acuta | ||
| 5237903 | 5237903 | PRJEB75017_P_NODE_17405_length_244_cov_1.350877_g17276_i0 | PRJEB75017 | 17405 | 244 | 1.350877 | 3.29613988 | Patella vulgata | 6465 | Mollusca | Mollusca | 174 | 4.5e-39 | NTclustered | gi|2506343379|ref|XM_050562084.2| | 6465 | g17276 | i0 | 79.675 | 1.00819672131148 | 246 | 46 | 100 | 4 | 1 | 244 | 377 | 620 | PREDICTED: Patella vulgata sperm-associated antigen 6 (LOC126831543), mRNA | blastn | 246 | 174 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Patellidae | Patella | Patella vulgata | ||
| 6513522 | 6513522 | PRJEB75017_P_NODE_5926_length_362_cov_2.553633_g5797_i0 | PRJEB75017 | 5926 | 362 | 2.553633 | 9.24415146 | Perna viridis | 73031 | Mollusca | Mollusca | 209 | 1.92e-49 | NTclustered | gi|56967588|gb|AY850128.1| | 73031 | g5797 | i0 | 93.662 | 0.392265193370166 | 142 | 6 | 39 | 2 | 181 | 320 | 169 | 29 | Perna viridis clone GM8 microsatellite sequence | blastn | 142 | 209 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Bivalvia | Mytilida | Mytilidae | Perna | Perna viridis | |
| 12474531 | 12474531 | PRJEB75017_P_NODE_3050_length_502_cov_1.198135_g2921_i0 | PRJEB75017 | 3050 | 502 | 1.198135 | 6.0146377 | Metazoa | 33208 | Mollusca | Mollusca | 315 | 5.67e-81 | NTclustered | gi|2506328437|ref|XM_050550622.2| | 6465 | g2921 | i0 | 78.2 | 19.9780876494024 | 500 | 103 | 99 | 6 | 1 | 497 | 336 | 832 | PREDICTED: Patella vulgata eukaryotic initiation factor 4A-III (LOC126821950), mRNA | blastn | 10029 | 315 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Patellidae | Patella | Patella vulgata | ||
| 12888951 | 12888951 | PRJEB75017_P_NODE_4551_length_410_cov_1.623145_g4422_i0 | PRJEB75017 | 4551 | 410 | 1.623145 | 6.6548945 | Biomphalaria glabrata | 6526 | Mollusca | Mollusca | 54.7 | 0.011 | NTclustered | gi|2502101643|ref|XM_013226731.2| | 6526 | g4422 | i0 | 92.105 | 0.641463414634146 | 38 | 3 | 9 | 0 | 72 | 109 | 2402 | 2365 | PREDICTED: Biomphalaria glabrata protein mono-ADP-ribosyltransferase PARP6-like (LOC106067544), transcript variant X3, mRNA | blastn | 263 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Planorbidae | Biomphalaria | Biomphalaria glabrata | ||
| 15437912 | 15437912 | PRJEB75017_P_NODE_9593_length_293_cov_1.418182_g9464_i0 | PRJEB75017 | 9593 | 293 | 1.418182 | 4.15527326 | Bradybaena similaris | 145626 | Mollusca | Mollusca | 56.5 | 0.002 | NTclustered | gi|2912981848|dbj|AP039587.1| | 145626 | g9464 | i0 | 100 | 0.102389078498294 | 30 | 0 | 10 | 0 | 263 | 292 | 37105207 | 37105236 | Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 6, sequence | blastn | 30 | 56.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Stylommatophora | Camaenidae | Bradybaena | Bradybaena similaris | |
| 20122099 | 20122099 | PRJEB75017_P_NODE_9416_length_295_cov_4.130631_g9287_i0 | PRJEB75017 | 9416 | 295 | 4.130631 | 12.18536145 | Metazoa | 33208 | Mollusca | Mollusca | 496 | 1.05e-135 | NTclustered | gi|2572452079|ref|XR_009385380.1| | 109671 | g9287 | i0 | 96.959 | 92.3016949152542 | 296 | 8 | 100 | 1 | 1 | 295 | 868 | 1163 | PREDICTED: Physella acuta large subunit ribosomal RNA (LOC131933988), rRNA | blastn | 27229 | 497 | 0.997987927565392 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Physidae | Physella | Physella acuta |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;