RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJEB75017" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 12 ✖

tax_clade 1

bioproject 1

  • PRJEB75017 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5237859 5237859 PRJEB75017_P_NODE_10825_length_281_cov_1.125000_g10696_i0 PRJEB75017 10825 281 1.125 3.16125 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|1084986293|ref|XM_018780700.1| 508771 g10696 i0 100 0.099644128113879 28 0 10 0 7 34 7593 7620 Toxoplasma gondii ME49 hypothetical protein mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
6513415 6513415 PRJEB75017_P_NODE_11486_length_274_cov_2.263682_g11357_i0 PRJEB75017 11486 274 2.263682 6.20248868 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 58.4 5.41e-4   NTclustered gi|916502880|ref|XM_013496737.1| 44415 g11357 i0 89.13 0.372262773722628 46 5 17 0 132 177 201 246 Eimeria mitis uncharacterized protein (EMH_0004320), partial mRNA blastn 102 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
6513431 6513431 PRJEB75017_P_NODE_13226_length_257_cov_2.233696_g13097_i0 PRJEB75017 13226 257 2.233696 5.74059872 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|921132467|ref|XM_013585315.1| 51315 g13097 i0 100 0.108949416342412 28 0 11 0 57 84 627 654 Eimeria necatrix hypothetical protein, conserved partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
11613816 11613816 PRJEB75017_P_NODE_13510_length_255_cov_1.285714_g13381_i0 PRJEB75017 13510 255 1.285714 3.2785707 Plasmodium berghei 5821 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|1843423058|dbj|LC541869.1| 5823 g13381 i0 100 0.117647058823529 30 0 12 0 28 57 51179 51150 Plasmodium berghei ANKA chromosome 1 telomere region, partial sequence blastn 30 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
11613840 11613840 PRJEB75017_P_NODE_16530_length_246_cov_1.352601_g16401_i0 PRJEB75017 16530 246 1.352601 3.32739846 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 159 1.27e-34   NTclustered gi|82914870|ref|XM_723786.1| 5861 g16401 i0 80.383 9.24390243902439 209 41 85 0 37 245 983 775 Plasmodium yoelii tubulin subunit alpha (PY17X_0420500), partial mRNA blastn 2274 159 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
12888864 12888864 PRJEB75017_P_NODE_10251_length_286_cov_1.784038_g10122_i0 PRJEB75017 10251 286 1.784038 5.10234868 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 169 2.52e-37   NTclustered gi|1673125678|ref|XM_029365676.1| 94643 g10122 i0 85.714 28.3671328671329 161 21 56 2 48 207 1255 1096 Besnoitia besnoiti chaperonin protein BiP (BESB_073030), partial mRNA blastn 8113 169 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
12888874 12888874 PRJEB75017_P_NODE_11051_length_279_cov_1.111650_g10922_i0 PRJEB75017 11051 279 1.11165 3.1015035 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 62.1 4.27e-5   NTclustered gi|916505532|ref|XM_013497862.1| 44415 g10922 i0 77.273 11.0609318996416 132 13 46 14 45 172 323 205 Eimeria mitis uncharacterized protein (EMH_0061120), partial mRNA blastn 3086 62.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
12888921 12888921 PRJEB75017_P_NODE_18271_length_242_cov_1.384615_g18142_i0 PRJEB75017 18271 242 1.384615 3.3507683 Plasmodium malariae 5858 SAR_Eukaryotes SAR_Eukaryotes 148 2.6999999999999997e-31   NTclustered gi|1624466873|ref|XM_029007108.1| 5858 g18142 i0 91.667 1.58677685950413 108 7 44 2 42 148 109 215 Plasmodium malariae eukaryotic translation initiation factor 5A, putative (EIF5A), partial mRNA blastn 384 148 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae
15437800 15437800 PRJEB75017_P_NODE_11453_length_275_cov_1.158416_g11324_i0 PRJEB75017 11453 275 1.158416 3.185644 Plasmodium gaboni 647221 SAR_Eukaryotes SAR_Eukaryotes 178 4e-40   NTclustered gi|1084839774|ref|XM_018785426.1| 647221 g11324 i0 78.571 16.2436363636364 280 53 100 6 1 275 698 975 Plasmodium gaboni heat shock protein 70 partial mRNA blastn 4467 178 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gaboni
15437914 15437914 PRJEB75017_P_NODE_9793_length_291_cov_1.279817_g9664_i0 PRJEB75017 9793 291 1.279817 3.72426747 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|915013849|ref|XM_013396674.1| 5801 g9664 i0 100 0.484536082474227 29 0 10 0 70 98 2146 2174 Eimeria acervulina hypothetical protein, conserved partial mRNA blastn 141 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
16712003 16712003 PRJEB75017_P_NODE_12974_length_260_cov_1.251337_g12845_i0 PRJEB75017 12974 260 1.251337 3.2534762 Babesia caballi 5871 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|2794943783|ref|XM_067859786.1| 5871 g12845 i0 96.97 0.773076923076923 33 1 13 0 133 165 1719 1687 Babesia caballi phage tail protein (BcabD6B2_32530), partial mRNA blastn 201 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi
17986903 17986903 PRJEB75017_P_NODE_13555_length_254_cov_2.011050_g13426_i0 PRJEB75017 13555 254 2.01105 5.108067 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 292 1.25e-74   NTclustered gi|1620122260|ref|XM_028671860.1| 5849 g13426 i0 90.222 76.9330708661417 225 20 88 2 1 224 671 894 Plasmodium gallinaceum serine/threonine protein phosphatase PP1, putative (PGAL8A_00286000), partial mRNA blastn 19541 292 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;