RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB75017" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB75017 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1409998 1409998 PRJEB75017_P_NODE_8202_length_314_cov_1.107884_g8073_i0 PRJEB75017 8202 314 1.107884 3.47875576 Ailoscolex lacteospumosus 1046305 Annelida Annelida 54.7 0.008   NTclustered gi|2920003593|emb|OZ238871.1| 1046305 g8073 i0 100 0.0923566878980892 29 0 9 0 115 143 20725471 20725499 Ailoscolex lacteospumosus genome assembly, chromosome: 12 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
2685395 2685395 PRJEB75017_P_NODE_1323_length_750_cov_3.369276_g1203_i0 PRJEB75017 1323 750 3.369276 25.26957 Helobdella robusta 6412 Annelida Annelida 62.1 1.25e-4   NTclustered gi|675876331|ref|XM_009025478.1| 6412 g1203 i0 94.872 1.404 39 2 5 0 228 266 870 908 Helobdella robusta hypothetical protein partial mRNA blastn 1053 62.1 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
10338378 10338378 PRJEB75017_P_NODE_14149_length_252_cov_1.307263_g14020_i0 PRJEB75017 14149 252 1.307263 3.29430276 Ailoscolex lacteospumosus 1046305 Annelida Annelida 54.7 0.006   NTclustered gi|2920003508|emb|OZ238866.1| 1046305 g14020 i0 100 0.115079365079365 29 0 12 0 213 241 21228423 21228451 Ailoscolex lacteospumosus genome assembly, chromosome: 7 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;