RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJEB7366" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB7366 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1409816 1409816 PRJEB7366_P_NODE_12102_length_232_cov_2.030457_g11668_i0 PRJEB7366 12102 232 2.030457 4.71066024 Proales similis 360698 Rotifera other_Eukaryota 126 1.2099999999999999e-24   NTclustered gi|1859640894|gb|MN970216.1| 360698 g11668 i0 79.31 1.76724137931034 203 25 85 16 6 202 8747 8556 Proales similis mitochondrion, complete genome blastn 410 126 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
2685362 2685362 PRJEB7366_P_NODE_703_length_1141_cov_6.779385_g514_i0 PRJEB7366 703 1141 6.779385 77.35278285 Brachionus rubens 392764 Rotifera other_Eukaryota 656 0   NTclustered gi|632795126|gb|KJ489417.1| 392764 g514 i0 80.157 25.5801928133216 892 165 78 12 4 889 18 903 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 29187 656 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
5237816 5237816 PRJEB7366_P_NODE_325_length_1533_cov_8.813752_g230_i0 PRJEB7366 325 1533 8.813752 135.11481816 Brachionus rubens 392764 Rotifera other_Eukaryota 1356 0   NTclustered gi|632795131|gb|KJ489418.1| 392764 g230 i0 82.66 52.0456621004566 1534 262 99 4 2 1533 22 1553 Brachionus rubens chromosome II mitochondrion, complete sequence blastn 79786 1356 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
9062543 9062543 PRJEB7366_P_NODE_348_length_1494_cov_96.378341_g246_i0 PRJEB7366 348 1494 96.378341 1439.89241454 Brachionus rubens 392764 Rotifera other_Eukaryota 669 0   NTclustered gi|632795131|gb|KJ489418.1| 392764 g246 i0 75.269 13.4946452476573 1488 324 98 38 31 1494 7070 5603 Brachionus rubens chromosome II mitochondrion, complete sequence blastn 20161 669 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
10338287 10338287 PRJEB7366_P_NODE_15629_length_197_cov_1.481481_g15195_i0 PRJEB7366 15629 197 1.481481 2.91851757 Proales similis 360698 Rotifera other_Eukaryota 148 2.1199999999999996e-31   NTclustered gi|2040501658|gb|MW836276.1| 360698 g15195 i0 80.829 0.979695431472081 193 33 97 3 4 194 886 1076 Proales similis isolate Ps_Hly3-2 G protein-coupled receptor mRNA, complete cds blastn 193 148 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
11613769 11613769 PRJEB7366_P_NODE_270_length_1606_cov_131.464672_g190_i0 PRJEB7366 270 1606 131.464672 2111.32263232 Asplanchna sp. 3231738 Rotifera other_Eukaryota 1216 0   NTclustered gi|2778092484|gb|PP988072.1| 3231738 g190 i0 81.039 49.6892901618929 1540 280 95 10 22 1552 25 1561 Asplanchna sp. chromosome II mitochondrion, complete sequence blastn 79801 1216 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sp.
11613788 11613788 PRJEB7366_P_NODE_670_length_1160_cov_66.823111_g490_i0 PRJEB7366 670 1160 66.823111 775.1480876 Brachionus rubens 392764 Rotifera other_Eukaryota 641 5.5199999999999996e-179   NTclustered gi|632795126|gb|KJ489417.1| 392764 g490 i0 80.376 36.451724137931 851 161 73 5 9 856 19 866 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 42284 641 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
15437760 15437760 PRJEB7366_P_NODE_3093_length_540_cov_9.817822_g2688_i0 PRJEB7366 3093 540 9.817822 53.016238800000004 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 204 1.3799999999999998e-47   NTclustered gi|1800329609|gb|MN417951.1| 104777 g2688 i0 76.762 5.18703703703704 383 77 70 11 1 377 10211 9835 Brachionus calyciflorus chromosome I mitochondrion, complete sequence blastn 2801 204 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
16711915 16711915 PRJEB7366_P_NODE_15994_length_194_cov_2.547170_g15560_i0 PRJEB7366 15994 194 2.54717 4.9415098 Philodina citrina 468664 Rotifera other_Eukaryota 309 9e-80   NTclustered gi|407227484|emb|FR856884.1| 468664 g15560 i0 95.361 4.92268041237113 194 9 100 0 1 194 2390 2197 Philodina citrina complete mitochondrial genome blastn 955 309 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
20536163 20536163 PRJEB7366_P_NODE_22697_length_158_cov_1.300813_g22263_i0 PRJEB7366 22697 158 1.300813 2.05528454 Proales similis 360698 Rotifera other_Eukaryota 182 1.5999999999999996e-41   NTclustered gi|1859640894|gb|MN970216.1| 360698 g22263 i0 87.5 11.6582278481013 160 16 100 3 1 158 12465 12308 Proales similis mitochondrion, complete genome blastn 1842 182 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
20536182 20536182 PRJEB7366_P_NODE_4897_length_412_cov_7.586207_g4464_i0 PRJEB7366 4897 412 7.586207 31.25517284 Lecane bulla 96446 Rotifera other_Eukaryota 592 1.8899999999999993e-164   NTclustered gi|61200802|gb|AY829083.1| 96446 g4464 i0 92.272 101.97572815534 427 17 99 11 2 412 1719 1293 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 42014 592 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
21812043 21812043 PRJEB7366_P_NODE_4058_length_462_cov_4.259953_g3633_i0 PRJEB7366 4058 462 4.259953 19.68098286 Brachionus plicatilis 10195 Rotifera other_Eukaryota 215 5.41e-51   NTclustered gi|567315823|dbj|AB775784.1| 10195 g3633 i0 78.07 3.48268398268398 342 73 74 2 122 462 1960 1620 Brachionus plicatilis hsp70-1 mRNA for heat shock 70 kDa protein 1, complete cds blastn 1609 215 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;