RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB7366" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB7366 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7787640 7787640 PRJEB7366_P_NODE_2667_length_588_cov_1.566004_g2271_i0 PRJEB7366 2667 588 1.566004 9.20810352 Oscarella lobularis 121494 Porifera other_Eukaryota 459 2.9299999999999992e-124   NTclustered gi|2746774523|ref|XM_065971111.1| 121494 g2271 i0 80.993 97.2908163265306 584 105 99 6 1 581 455 1035 PREDICTED: Oscarella lobularis tubulin beta-4B chain (LOC136184245), mRNA blastn 57207 459 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
9923569 9923569 PRJEB7366_P_NODE_21168_length_164_cov_3.410853_g20734_i0 PRJEB7366 21168 164 3.410853 5.59379892 Metazoa 33208 Porifera other_Eukaryota 110 8.01e-20   NTclustered gi|2749508265|ref|XM_066030399.1| 196820 g20734 i0 81.679 24.2865853658537 131 24 80 0 19 149 287 157 PREDICTED: Dysidea avara tubulin alpha-1A chain-like (LOC136239626), mRNA blastn 3983 111 0.990990990990991 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;