RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB7366" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB7366 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3961341 3961341 PRJEB7366_P_NODE_1844_length_722_cov_6.005822_g1493_i1 PRJEB7366 1844 722 6.005822 43.36203484 uncultured Gemmataceae bacterium 1914239 Bacteria Bacteria 830 0   NTclustered gi|2874253749|emb|OY969623.1| 1914239 g1493 i1 87.432 195.027700831025 740 70 100 18 1 722 7050217 7050951 MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 blastn 140810 830 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   uncultured Gemmataceae bacterium
10338291 10338291 PRJEB7366_P_NODE_1829_length_725_cov_5.195652_g1493_i0 PRJEB7366 1829 725 5.195652 37.668477 uncultured Gemmataceae bacterium 1914239 Bacteria Bacteria 688 0   NTclustered gi|2874253749|emb|OY969623.1| 1914239 g1493 i0 84.384 88.7751724137931 730 83 98 22 1 710 7050951 7050233 MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 blastn 64362 688 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   uncultured Gemmataceae bacterium
11613733 11613733 PRJEB7366_P_NODE_11890_length_235_cov_1.305000_g11456_i0 PRJEB7366 11890 235 1.305 3.06675 Singulisphaera sp. Ch08 3120278 Bacteria Bacteria 289 1.47e-73   NTclustered gi|2732846650|gb|CP155447.1| 3120278 g11456 i0 89.03 166.042553191489 237 21 100 5 1 235 2809208 2808975 Singulisphaera sp. Ch08 chromosome, complete genome blastn 39020 289 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Singulisphaera Singulisphaera sp. Ch08
17986827 17986827 PRJEB7366_P_NODE_16675_length_189_cov_4.272727_g16241_i0 PRJEB7366 16675 189 4.272727 8.07545403 uncultured Gemmataceae bacterium 1914239 Bacteria Bacteria 289 1.14e-73   NTclustered gi|2874253749|emb|OY969623.1| 1914239 g16241 i0 94.18 697.513227513228 189 11 100 0 1 189 7053135 7053323 MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 blastn 131830 289 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   uncultured Gemmataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;