RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJEB7366" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB7366 · 17 ✖

analysis 1

  • blastn · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
135238 135238 PRJEB7366_P_NODE_12421_length_228_cov_2.450777_g11987_i0 PRJEB7366 12421 228 2.450777 5.58777156 Pecten maximus 6579 Mollusca Mollusca 183 6.909999999999998e-42   NTclustered gi|1835454412|ref|XM_033892547.1| 6579 g11987 i0 82.464 57.3947368421053 211 35 92 2 19 228 128 337 PREDICTED: Pecten maximus dynein light chain 2, cytoplasmic-like (LOC117333310), mRNA blastn 13086 183 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
995543 995543 PRJEB7366_P_NODE_21121_length_165_cov_1.223077_g20687_i0 PRJEB7366 21121 165 1.223077 2.01807705 Metazoa 33208 Mollusca Mollusca 52.8 0.014   NTclustered gi|2427390617|ref|XM_052917999.1| 6604 g20687 i0 100 2.66666666666667 28 0 17 0 125 152 5153 5126 PREDICTED: Mya arenaria protein mono-ADP-ribosyltransferase PARP14-like (LOC128212513), mRNA blastn 440 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
1409821 1409821 PRJEB7366_P_NODE_13642_length_215_cov_1.544444_g13208_i0 PRJEB7366 13642 215 1.544444 3.3205546 Haliotis cracherodii 6455 Mollusca Mollusca 82.4 2.42e-11   NTclustered gi|2911900731|ref|XM_071228667.1| 6455 g13208 i0 82.609 4.86511627906977 92 16 43 0 119 210 527 436 PREDICTED: Haliotis cracherodii AP-1 complex subunit sigma-2 (LOC139447359), transcript variant X2, mRNA blastn 1046 82.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis cracherodii
2685322 2685322 PRJEB7366_P_NODE_20223_length_169_cov_1.477612_g19789_i0 PRJEB7366 20223 169 1.477612 2.49716428 Haliotis asinina 109174 Mollusca Mollusca 56.5 0.001   NTclustered gi|2793396579|ref|XM_067810234.1| 109174 g19789 i0 100 0.355029585798817 30 0 18 0 81 110 1812 1783 PREDICTED: Haliotis asinina uncharacterized protein (LOC137278111), transcript variant X1, mRNA blastn 60 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
3961358 3961358 PRJEB7366_P_NODE_22764_length_158_cov_0.975610_g22330_i0 PRJEB7366 22764 158 0.97561 1.5414638 Patella vulgata 6465 Mollusca Mollusca 69.4 1.3e-7   NTclustered gi|2296487029|ref|XM_050550550.1| 6465 g22330 i0 87.931 0.664556962025316 58 7 37 0 62 119 724 781 PREDICTED: Patella vulgata DNA-directed RNA polymerases I and III subunit RPAC1 (LOC126821922), mRNA blastn 105 69.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
6513384 6513384 PRJEB7366_P_NODE_5526_length_382_cov_2.170029_g5093_i0 PRJEB7366 5526 382 2.170029 8.28951078 Saccostrea kegaki 182713 Mollusca Mollusca 60.2 2.18e-4   NTclustered gi|194068384|dbj|AB374934.1| 182713 g5093 i0 94.737 0.772251308900524 38 2 10 0 180 217 548 585 Saccostrea kegaki mRNA for high mobility group 1 protein, partial cds blastn 295 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea kegaki
7787659 7787659 PRJEB7366_P_NODE_6187_length_356_cov_1.501558_g5754_i0 PRJEB7366 6187 356 1.501558 5.34554648 Argopecten irradians 31199 Mollusca Mollusca 209 1.89e-49   NTclustered gi|2835328318|ref|XM_069268921.1| 31199 g5754 i0 78.378 2.98033707865169 333 64 92 5 4 332 256 584 PREDICTED: Argopecten irradians charged multivesicular body protein 2a-like (LOC138323954), transcript variant X2, mRNA blastn 1061 209 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
7787664 7787664 PRJEB7366_P_NODE_827_length_1071_cov_5.915058_g610_i0 PRJEB7366 827 1071 5.915058 63.35027118 Mya arenaria 6604 Mollusca Mollusca 58.4 0.002   NTclustered gi|2427531503|ref|XM_052963179.1| 6604 g610 i0 100 0.0840336134453782 31 0 3 0 767 797 1836 1806 PREDICTED: Mya arenaria uncharacterized LOC128244994 (LOC128244994), partial mRNA blastn 90 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
7787668 7787668 PRJEB7366_P_NODE_8987_length_281_cov_3.800813_g8553_i0 PRJEB7366 8987 281 3.800813 10.68028453 Lottia gigantea 225164 Mollusca Mollusca 158 5.34e-34   NTclustered gi|676496756|ref|XM_009069071.1| 225164 g8553 i0 88.06 73.4590747330961 134 14 47 2 149 281 733 601 Lottia gigantea hypothetical protein mRNA blastn 20642 158 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
10338311 10338311 PRJEB7366_P_NODE_24209_length_152_cov_1.709402_g23775_i0 PRJEB7366 24209 152 1.709402 2.59829104 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.001   NTclustered gi|2912985489|dbj|AP039590.1| 145626 g23775 i0 100 0.572368421052632 30 0 20 0 109 138 61988571 61988542 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 9, sequence blastn 87 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
11198829 11198829 PRJEB7366_P_NODE_14869_length_203_cov_4.398810_g14435_i0 PRJEB7366 14869 203 4.39881 8.9295843 Mollusca 6447 Mollusca Mollusca 145 2.84e-30   NTclustered gi|2364282944|ref|XM_052359824.1| 45954 g14435 i0 88.333 16.3891625615764 120 14 59 0 84 203 180 299 PREDICTED: Dreissena polymorpha dynein light chain 1, cytoplasmic-like (LOC127834179), mRNA blastn 3327 145 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
11613748 11613748 PRJEB7366_P_NODE_17290_length_185_cov_2.126667_g16856_i0 PRJEB7366 17290 185 2.126667 3.93433395 Ylistrum balloti 509963 Mollusca Mollusca 148 1.96e-31   NTclustered gi|2592066134|ref|XM_060212732.1| 509963 g16856 i0 81.319 0.983783783783784 182 34 98 0 2 183 13621 13802 PREDICTED: Ylistrum balloti dynein axonemal heavy chain 10-like (LOC132548837), mRNA blastn 182 148 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti
16298171 16298171 PRJEB7366_P_NODE_12473_length_228_cov_1.176166_g12039_i0 PRJEB7366 12473 228 1.176166 2.68165848 Metazoa 33208 Mollusca Mollusca 60.2 1.21e-4   NTclustered gi|2868681482|ref|XM_070325302.1| 31220 g12039 i0 97.143 1.49122807017544 35 1 15 0 172 206 500 466 PREDICTED: Littorina saxatilis nucleolar and coiled-body phosphoprotein 1-like (LOC138953464), transcript variant X2, mRNA blastn 340 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
16711946 16711946 PRJEB7366_P_NODE_2614_length_595_cov_2.428571_g2220_i0 PRJEB7366 2614 595 2.428571 14.44999745 Mytilus californianus 6549 Mollusca Mollusca 370 1.43e-97   NTclustered gi|2334627999|ref|XM_052218573.1| 6549 g2220 i0 80.119 78.0235294117647 503 94 84 5 2 501 968 1467 PREDICTED: Mytilus californianus tubulin alpha-1A chain-like (LOC127712247), mRNA blastn 46424 370 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
20122066 20122066 PRJEB7366_P_NODE_7436_length_317_cov_2.127660_g7002_i0 PRJEB7366 7436 317 2.12766 6.7446822 Metazoa 33208 Mollusca Mollusca 56.5 0.002   NTclustered gi|2912996298|dbj|AP039601.1| 145626 g7002 i0 100 0.845425867507886 30 0 9 0 188 217 43153522 43153493 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 20, sequence blastn 268 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
20536127 20536127 PRJEB7366_P_NODE_11497_length_240_cov_1.790244_g11063_i0 PRJEB7366 11497 240 1.790244 4.2965856 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.022   NTclustered gi|2912998015|dbj|AP039603.1| 145626 g11063 i0 96.774 0.129166666666667 31 1 13 0 102 132 52424515 52424545 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 22, sequence blastn 31 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
20536206 20536206 PRJEB7366_P_NODE_9357_length_275_cov_1.254167_g8923_i0 PRJEB7366 9357 275 1.254167 3.44895925 Ostrea edulis 37623 Mollusca Mollusca 54.7 0.007   NTclustered gi|2507386821|ref|XM_048906436.2| 37623 g8923 i0 96.97 0.12 33 0 12 1 140 171 1456 1488 PREDICTED: Ostrea edulis mucin-22-like (LOC125670972), mRNA blastn 33 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Ostrea Ostrea edulis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;