RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB7366" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB7366 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3961395 3961395 PRJEB7366_P_NODE_8404_length_293_cov_2.472868_g7970_i0 PRJEB7366 8404 293 2.472868 7.24550324 Mayorella sp. JJP-2003 242541 Discosea other_Eukaryota 351 2.39e-92   NTclustered gi|33946346|gb|AY294152.1| 242541 g7970 i0 93.966 89.778156996587 232 14 79 0 62 293 1134 903 Mayorella sp. JJP-2003 actin mRNA, partial cds blastn 26305 351 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003
19260868 19260868 PRJEB7366_P_NODE_7276_length_322_cov_1.393728_g6842_i0 PRJEB7366 7276 322 1.393728 4.48780416 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 56.5 0.002   NTclustered gi|470523679|ref|XM_004355001.1| 1257118 g6842 i0 94.444 0.211180124223602 36 2 11 0 206 241 4626 4591 Acanthamoeba castellanii str. Neff Tyrosine kinase, putative (ACA1_006130), partial mRNA blastn 68 56.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;