RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJEB7366" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB7366 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1409871 1409871 PRJEB7366_P_NODE_7262_length_322_cov_2.090592_g6828_i0 PRJEB7366 7262 322 2.090592 6.73170624 Hydra vulgaris 6087 Cnidaria other_Eukaryota 239 2.1600000000000003e-58   NTclustered gi|2744794754|ref|XM_002161824.5| 6087 g6828 i0 80.124 88.2795031055901 322 62 99 2 1 321 333 653 PREDICTED: Hydra vulgaris tubulin beta chain (LOC100199191), mRNA blastn 28426 239 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
3961363 3961363 PRJEB7366_P_NODE_23804_length_154_cov_1.008403_g23370_i0 PRJEB7366 23804 154 1.008403 1.55294062 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.004   NTclustered gi|2917940740|emb|OZ237567.1| 6108 g23370 i0 100 0.188311688311688 29 0 19 0 125 153 1281858 1281830 Anemonia sulcata genome assembly, chromosome: 13 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
6513375 6513375 PRJEB7366_P_NODE_4106_length_460_cov_1.574118_g3681_i0 PRJEB7366 4106 460 1.574118 7.2409428 Eunicella cavolini 317547 Cnidaria other_Eukaryota 54.7 0.012   NTclustered gi|2918369540|emb|OZ237722.1| 317547 g3681 i0 100 0.0630434782608696 29 0 6 0 1 29 919562 919590 Eunicella cavolini genome assembly, chromosome: 6 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
11613763 11613763 PRJEB7366_P_NODE_23070_length_156_cov_1.983471_g22636_i0 PRJEB7366 23070 156 1.983471 3.09421476 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 69.4 1.28e-7   NTclustered gi|1778028824|ref|XM_031695779.1| 6105 g22636 i0 95.349 0.474358974358974 43 2 28 0 105 147 349 391 PREDICTED: Actinia tenebrosa peroxisomal membrane protein PEX13-like (LOC116288914), mRNA blastn 74 69.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
19260816 19260816 PRJEB7366_P_NODE_11276_length_243_cov_1.730769_g10842_i0 PRJEB7366 11276 243 1.730769 4.20576867 Hydra vulgaris 6087 Cnidaria other_Eukaryota 158 4.51e-34   NTclustered gi|2744907824|ref|XM_065819210.1| 6087 g10842 i0 90.083 48.1687242798354 121 12 50 0 123 243 1990 1870 PREDICTED: Hydra vulgaris tubulin beta chain-like (LOC136091537), mRNA blastn 11705 158 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;