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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJEB7366" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 14 ✖

bioproject 1

  • PRJEB7366 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1409817 1409817 PRJEB7366_P_NODE_12442_length_228_cov_1.699482_g12008_i0 PRJEB7366 12442 228 1.699482 3.87481896 Acrasis rosea 43695 Heterolobosea other_Eukaryota 274 3.98e-69   NTclustered gi|12083876|gb|AF190771.1|AF190771 43695 g12008 i0 88.789 14.969298245614 223 25 98 0 6 228 678 456 Acrasis rosea elongation factor 1 alpha (tef1) gene, partial cds blastn 3413 274 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis rosea
5237788 5237788 PRJEB7366_P_NODE_15125_length_201_cov_1.969880_g14691_i0 PRJEB7366 15125 201 1.96988 3.9594588 Trypanosoma melophagium 715481 Euglenozoa other_Eukaryota 135 1.6900000000000003e-27   NTclustered gi|2787690126|ref|XM_067335354.1| 715481 g14691 i0 80.556 0.895522388059702 180 31 89 4 5 182 1177 1000 Trypanosoma melophagium Cys/Met metabolism (LSM04_005190), partial mRNA blastn 180 135 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma melophagium
9923566 9923566 PRJEB7366_P_NODE_17328_length_185_cov_1.580000_g16894_i0 PRJEB7366 17328 185 1.58 2.923 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 337 3.89e-88   NTclustered gi|89148133|gb|DQ388519.1| 373143 g16894 i0 99.462 41.0810810810811 186 0 100 1 1 185 2246 2431 Heterolobosea sp. BA 16S small subunit ribosomal RNA gene, partial sequence; and His-Cys box homing endonuclease gene, complete cds blastn 7600 337 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. BA
9923580 9923580 PRJEB7366_P_NODE_9488_length_272_cov_1.489451_g9054_i0 PRJEB7366 9488 272 1.489451 4.05130672 root 1 Root_unresolved Root_unresolved 60.2 1.49e-4   NTclustered gi|14485025|gb|AF353632.1|AF353632 5702 g9054 i0 100 14.1286764705882 32 0 12 0 59 90 278 247 Trypanosoma brucei brucei surface protein EP3-3 procyclin precursor (EP3-3) gene, EP3-3-GPEET/PAG3-2 allele, complete cds blastn 3843 60.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
10338293 10338293 PRJEB7366_P_NODE_19389_length_173_cov_1.739130_g18955_i0 PRJEB7366 19389 173 1.73913 3.0086949 Herpetomonas muscarum 5718 Euglenozoa other_Eukaryota 154 3.87e-33   NTclustered gi|529495812|gb|KC503374.1| 5718 g18955 i0 82.759 23.0057803468208 174 28 100 2 1 173 976 1148 Herpetomonas muscarum clone H1_3.3.1.1 adenosylhomocysteinase gene, complete cds blastn 3980 154 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Herpetomonas Herpetomonas muscarum
12888809 12888809 PRJEB7366_P_NODE_20231_length_169_cov_1.440299_g19797_i0 PRJEB7366 20231 169 1.440299 2.43410531 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 213 6.12e-51   NTclustered gi|2124407020|ref|XM_044688070.1| 51637 g19797 i0 89.349 78.2603550295858 169 18 100 0 1 169 247 79 Naegleria lovaniensis uncharacterized protein (C9374_012317), partial mRNA blastn 13226 213 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
12888849 12888849 PRJEB7366_P_NODE_7051_length_328_cov_7.296928_g6617_i0 PRJEB7366 7051 328 7.296928 23.93392384 Trypanosoma rangeli 5698 Euglenozoa other_Eukaryota 222 2.22e-53   NTclustered gi|24286542|gb|AY147904.1| 5698 g6617 i0 83.761 7.22560975609756 234 38 71 0 61 294 46 279 Trypanosoma rangeli kinetoplastid membrane protein 11 gene, complete cds blastn 2370 222 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
15437735 15437735 PRJEB7366_P_NODE_18773_length_176_cov_2.248227_g18339_i0 PRJEB7366 18773 176 2.248227 3.95687952 Percolomonas cosmopolitus 63605 Heterolobosea other_Eukaryota 265 1.7499999999999998e-66   NTclustered gi|33089879|gb|AY283748.1| 63605 g18339 i0 93.785 99.4204545454545 177 9 100 2 1 176 181 6 Percolomonas cosmopolitus isolate Gym67_1 actin gene, partial cds blastn 17498 265 1 Eukaryota Discoba   Heterolobosea     Percolomonadidae Percolomonas Percolomonas cosmopolitus
15437767 15437767 PRJEB7366_P_NODE_453_length_1366_cov_6.954921_g320_i0 PRJEB7366 453 1366 6.954921 95.00422086 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 1644 0   NTclustered gi|226347408|gb|FJ807243.1| 56466 g320 i0 88.681 96.3674963396779 1334 151 98 0 1 1334 1334 1 Peranema trichophorum strain CCAP 1260/1 B elongation factor 1 alpha mRNA, partial cds blastn 131638 1644 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
16711965 16711965 PRJEB7366_P_NODE_6114_length_358_cov_2.058824_g5681_i0 PRJEB7366 6114 358 2.058824 7.37058992 Euglena agilis 96764 Euglenozoa other_Eukaryota 243 1.8700000000000001e-59   NTclustered gi|1020992084|gb|KT984750.1| 96764 g5681 i0 80.769 56.8659217877095 312 58 87 2 47 357 48 358 Euglena agilis strain ACOI 2970 clone B heat shock protein 90 (hsp90) mRNA, complete cds blastn 20358 243 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena agilis
20536151 20536151 PRJEB7366_P_NODE_18717_length_177_cov_1.063380_g18283_i0 PRJEB7366 18717 177 1.06338 1.8821826 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 239 1.07e-58   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g18283 i0 90.96 3 177 16 100 0 1 177 4115 4291 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 531 239 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
21812036 21812036 PRJEB7366_P_NODE_2878_length_562_cov_2.020873_g2475_i0 PRJEB7366 2878 562 2.020873 11.35730626 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 617 4.3499999999999997e-172   NTclustered gi|118738152|gb|EF114757.1| 56466 g2475 i0 86.583 0.994661921708185 559 75 99 0 1 559 764 1322 Peranema trichophorum pyruvate:NADP+ oxidoreductase (pno) mRNA, partial cds blastn 559 617 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
23087040 23087040 PRJEB7366_P_NODE_17659_length_183_cov_1.351351_g17225_i0 PRJEB7366 17659 183 1.351351 2.47297233 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 331 1.79e-86   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g17225 i0 99.451 14.0109289617486 182 1 99 0 2 183 3402 3221 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2564 331 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
23087088 23087088 PRJEB7366_P_NODE_859_length_1055_cov_3.276471_g637_i0 PRJEB7366 859 1055 3.276471 34.56676905 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 769 0   NTclustered gi|427188201|dbj|AB757706.1| 56466 g637 i0 84.439 3.07109004739337 784 118 74 3 14 795 788 7 Peranema trichophorum rpl3 mRNA for 60S ribosomal protein L3, partial cds, strain: K-01 blastn 3240 769 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;