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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJEB7366" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 15 ✖

bioproject 1

  • PRJEB7366 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
135263 135263 PRJEB7366_P_NODE_21001_length_165_cov_1.953846_g20567_i0 PRJEB7366 21001 165 1.953846 3.2238459 Cavenderia fasciculata 261658 Evosea other_Eukaryota 124 2.88e-24   NTclustered gi|470245387|ref|XM_004356373.1| 261658 g20567 i0 83.333 2.66666666666667 138 19 82 4 30 165 1775 1640 Cavenderia fasciculata isoleucyl-tRNA synthetase (ileS), partial mRNA blastn 440 124 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
2685315 2685315 PRJEB7366_P_NODE_16823_length_188_cov_3.039216_g16389_i0 PRJEB7366 16823 188 3.039216 5.71372608 Dictyostelium discoideum 44689 Evosea other_Eukaryota 54.7 0.004   NTclustered gi|66816706|ref|XM_637271.1| 352472 g16389 i0 94.444 0.356382978723404 36 1 19 1 15 50 329 295 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0278433) mRNA, complete cds blastn 67 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
3961395 3961395 PRJEB7366_P_NODE_8404_length_293_cov_2.472868_g7970_i0 PRJEB7366 8404 293 2.472868 7.24550324 Mayorella sp. JJP-2003 242541 Discosea other_Eukaryota 351 2.39e-92   NTclustered gi|33946346|gb|AY294152.1| 242541 g7970 i0 93.966 89.778156996587 232 14 79 0 62 293 1134 903 Mayorella sp. JJP-2003 actin mRNA, partial cds blastn 26305 351 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003
5237786 5237786 PRJEB7366_P_NODE_14165_length_210_cov_1.257143_g13731_i0 PRJEB7366 14165 210 1.257143 2.6400003 Dianema sp. (in: plasmodial slime molds) 2046418 Evosea other_Eukaryota 145 2.96e-30   NTclustered gi|1883421900|gb|MT162160.1| 2046418 g13731 i0 81.461 74.4047619047619 178 32 84 1 30 206 1028 851 Dianema sp. (in: Myxogastria) voucher KRAM:M1506 elongation factor 1-alpha (EF1A) gene, partial cds blastn 15625 145 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Dianemataceae Dianema Dianema sp. (in: plasmodial slime molds)
7787638 7787638 PRJEB7366_P_NODE_2507_length_612_cov_1.573657_g2121_i0 PRJEB7366 2507 612 1.573657 9.63078084 Dictyostelium discoideum 44689 Evosea other_Eukaryota 732 0   NTclustered gi|66821326|ref|XM_639065.1| 352472 g2121 i0 88.254 100.014705882353 613 70 100 2 1 612 232 843 Dictyostelium discoideum AX4 hypothetical protein (act13) mRNA, complete cds blastn 61209 732 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
10338336 10338336 PRJEB7366_P_NODE_749_length_1111_cov_11.751859_g549_i0 PRJEB7366 749 1111 11.751859 130.56315349 Amoeba proteus 5775 Tubulinea other_Eukaryota 1086 0   NTclustered gi|33946362|gb|AY294160.1| 5775 g549 i0 84.338 96.1458145814581 1111 172 99 2 1 1110 3 1112 Amoeba proteus actin mRNA, complete cds blastn 106818 1086 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
14163647 14163647 PRJEB7366_P_NODE_1592_length_783_cov_4.573529_g1273_i0 PRJEB7366 1592 783 4.573529 35.81073207 Chaos carolinense 160823 Tubulinea other_Eukaryota 640 1.32e-178   NTclustered gi|33946356|gb|AY294157.1| 160823 g1273 i0 81.481 94.8569604086845 783 142 99 3 1 781 55 836 Chaos carolinense actin mRNA, partial cds blastn 74273 640 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Chaos Chaos carolinense
14163688 14163688 PRJEB7366_P_NODE_7452_length_317_cov_1.294326_g7018_i0 PRJEB7366 7452 317 1.294326 4.10301342 Copromyxa protea 931554 Tubulinea other_Eukaryota 315 3.4299999999999993e-81   NTclustered gi|508737347|dbj|AB766053.1| 931554 g7018 i0 85.859 0.936908517350158 297 40 93 2 12 307 1090 1385 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 297 315 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
15437777 15437777 PRJEB7366_P_NODE_7853_length_307_cov_1.617647_g7419_i0 PRJEB7366 7853 307 1.617647 4.96617629 Lamproderma pulveratum 1115717 Evosea other_Eukaryota 255 2.03e-63   NTclustered gi|2301599501|gb|MZ044070.1| 1115717 g7419 i0 82.06 81.5374592833876 301 52 98 2 1 300 325 26 Lamproderma pulveratum voucher MYX8389 translation elongation factor 1-alpha (EF1a) gene, partial cds blastn 25032 255 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Lamproderma Lamproderma pulveratum
16711920 16711920 PRJEB7366_P_NODE_17094_length_187_cov_1.046053_g16660_i0 PRJEB7366 17094 187 1.046053 1.95611911 Heterostelium album 2086695 Evosea other_Eukaryota 52.8 0.016   NTclustered gi|1160568546|ref|XM_020581517.1| 670386 g16660 i0 100 0.149732620320856 28 0 15 0 21 48 159 132 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
19260820 19260820 PRJEB7366_P_NODE_11816_length_236_cov_1.194030_g11382_i0 PRJEB7366 11816 236 1.19403 2.8179108 Dictyostelium discoideum 44689 Evosea other_Eukaryota 54.7 0.006   NTclustered gi|66809100|ref|XM_633181.1| 352472 g11382 i0 100 0.610169491525424 29 0 12 0 205 233 2036 2064 Dictyostelium discoideum AX4 guanine nucleotide binding protein 1 (gnl1) mRNA, complete cds blastn 144 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
19260868 19260868 PRJEB7366_P_NODE_7276_length_322_cov_1.393728_g6842_i0 PRJEB7366 7276 322 1.393728 4.48780416 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 56.5 0.002   NTclustered gi|470523679|ref|XM_004355001.1| 1257118 g6842 i0 94.444 0.211180124223602 36 2 11 0 206 241 4626 4591 Acanthamoeba castellanii str. Neff Tyrosine kinase, putative (ACA1_006130), partial mRNA blastn 68 56.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19260875 19260875 PRJEB7366_P_NODE_8696_length_287_cov_1.587302_g8262_i0 PRJEB7366 8696 287 1.587302 4.55555674 Heterostelium album 2086695 Evosea other_Eukaryota 58.4 5.7e-4   NTclustered gi|1160571886|ref|XM_020575437.1| 670386 g8262 i0 94.595 0.128919860627178 37 2 13 0 101 137 362 326 Polysphondylium pallidum PN500 DNA topoisomerase II (top2), partial mRNA blastn 37 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
24361083 24361083 PRJEB7366_P_NODE_24060_length_153_cov_1.016949_g23626_i0 PRJEB7366 24060 153 1.016949 1.55593197 Filamoeba sinensis 308476 Evosea other_Eukaryota 95.3 2.05e-15   NTclustered gi|146448851|gb|EF513193.1| 308476 g23626 i0 78.231 9.68627450980392 147 32 96 0 2 148 1196 1342 Filamoeba sinensis elongation factor 1A (EF1A) gene, partial cds blastn 1482 95.3 1 Eukaryota Amoebozoa   Evosea Variosea     Filamoeba Filamoeba sinensis
25221672 25221672 PRJEB7366_P_NODE_14060_length_211_cov_1.102273_g13626_i0 PRJEB7366 14060 211 1.102273 2.32579603 Entamoeba 5758 Evosea other_Eukaryota 132 2.31e-26   NTclustered gi|57157180|dbj|AB092411.1| 5759 g13626 i0 79.888 3.39336492890995 179 36 85 0 33 211 1370 1548 Entamoeba histolytica gene for cytosolic-type hsp90, partial cds blastn 716 132 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;