RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB73599" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB73599 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
135222 135222 PRJEB73599_P_NODE_9381_length_164_cov_2.007407_g9094_i0 PRJEB73599 9381 164 2.007407 3.29214748 uncultured Methanoregula sp. 1005933 Archaea Archaea 298 1.59e-76   NTclustered gi|2621784703|emb|OY781161.1| 1005933 g9094 i0 99.39 93.5609756097561 164 1 100 0 1 164 2659680 2659517 MAG: uncultured Methanoregula sp. isolate bdb6c56a-0f97-41a9-9319-40fe56c94967 genome assembly, chromosome: 1 blastn 15344 298 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
14163579 14163579 PRJEB73599_P_NODE_4452_length_320_cov_1.931271_g4165_i0 PRJEB73599 4452 320 1.931271 6.1800672 uncultured archaeon 115547 Archaea Archaea 564 3.12e-156   NTclustered gi|765560193|gb|KP308694.1| 115547 g4165 i0 98.438 117.5 320 5 100 0 1 320 4425 4744 Uncultured archaeon clone RBG_19_scaffold_9279 genomic sequence blastn 37600 564 1 Archaea               uncultured archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;