contig_metadata
20 rows where analysis = "blastn", bioproject = "PRJEB73599" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1409757 | 1409757 | PRJEB73599_P_NODE_362_length_1212_cov_17.841082_g172_i2 | PRJEB73599 | 362 | 1212 | 17.841082 | 216.23391384 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 1895 | 0 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g172 | i2 | 94.967 | 112.650165016502 | 1212 | 56 | 99 | 5 | 4 | 1212 | 5153737 | 5152528 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 136532 | 1895 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 2685254 | 2685254 | PRJEB73599_P_NODE_4203_length_333_cov_4.615132_g3916_i0 | PRJEB73599 | 4203 | 333 | 4.615132 | 15.36838956 | Nibricoccus sp. IMCC34717 | 3034021 | Bacteria | Bacteria | 300 | 1.02e-76 | NTclustered | gi|2850969968|gb|CP119759.1| | 3034021 | g3916 | i0 | 88.664 | 126.621621621622 | 247 | 27 | 94 | 1 | 87 | 333 | 1403603 | 1403848 | Nibricoccus sp. IMCC34717 chromosome, complete genome | blastn | 42165 | 300 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus sp. IMCC34717 | |
| 3961318 | 3961318 | PRJEB73599_P_NODE_9464_length_162_cov_6.977444_g9177_i0 | PRJEB73599 | 9464 | 162 | 6.977444 | 11.30345928 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 217 | 4.5199999999999996e-52 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g9177 | i0 | 90.741 | 95.4135802469136 | 162 | 15 | 100 | 0 | 1 | 162 | 5152392 | 5152553 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 15457 | 217 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 6098683 | 6098683 | PRJEB73599_P_NODE_1225_length_678_cov_6.052388_g1033_i0 | PRJEB73599 | 1225 | 678 | 6.052388 | 41.03519064 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 553 | 1.5199999999999995e-152 | NTclustered | gi|297180506|gb|GU474845.1| | 710995 | g1033 | i0 | 83.498 | 96.1401179941003 | 606 | 86 | 89 | 12 | 78 | 678 | 1169 | 1765 | Uncultured Verrucomicrobiales bacterium HF0010_05E02 genomic sequence | blastn | 65183 | 555 | 0.996396396396396 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | uncultured Verrucomicrobiales bacterium HF0010_05E02 | |||
| 7787545 | 7787545 | PRJEB73599_P_NODE_4407_length_322_cov_8.470990_g4120_i0 | PRJEB73599 | 4407 | 322 | 8.47099 | 27.2765878 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 422 | 2e-113 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g4120 | i0 | 90.596 | 35.7080745341615 | 319 | 29 | 99 | 1 | 5 | 322 | 1316535 | 1316217 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 11498 | 422 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 9062436 | 9062436 | PRJEB73599_P_NODE_2888_length_427_cov_9.608040_g2609_i0 | PRJEB73599 | 2888 | 427 | 9.60804 | 41.0263308 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 595 | 1.5199999999999994e-165 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g2609 | i0 | 91.803 | 115.351288056206 | 427 | 35 | 100 | 0 | 1 | 427 | 1519 | 1093 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 49255 | 595 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 12888694 | 12888694 | PRJEB73599_P_NODE_10031_length_152_cov_3.268293_g9744_i0 | PRJEB73599 | 10031 | 152 | 3.268293 | 4.96780536 | Verrucomicrobium sp. GAS474 | 1882831 | Bacteria | Bacteria | 115 | 1.5600000000000002e-21 | NTclustered | gi|1085974270|emb|LT629781.1| | 1882831 | g9744 | i0 | 82.443 | 19.1052631578947 | 131 | 23 | 86 | 0 | 1 | 131 | 3537760 | 3537890 | Verrucomicrobiaceae bacterium GAS474 genome assembly, chromosome: I | blastn | 2904 | 115 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium sp. GAS474 | |
| 12888754 | 12888754 | PRJEB73599_P_NODE_6351_length_239_cov_2.380952_g6064_i0 | PRJEB73599 | 6351 | 239 | 2.380952 | 5.69047528 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 344 | 3.16e-90 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g6064 | i0 | 91.632 | 19.4058577405858 | 239 | 17 | 100 | 2 | 1 | 239 | 27788 | 27553 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 4638 | 344 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 12888767 | 12888767 | PRJEB73599_P_NODE_8311_length_184_cov_8.348387_g8024_i0 | PRJEB73599 | 8311 | 184 | 8.348387 | 15.36103208 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 255 | 1.11e-63 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g8024 | i0 | 92.308 | 25.3369565217391 | 182 | 11 | 98 | 2 | 4 | 183 | 1117 | 937 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 4662 | 255 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 12888780 | 12888780 | PRJEB73599_P_NODE_9931_length_154_cov_3.056000_g9644_i0 | PRJEB73599 | 9931 | 154 | 3.056 | 4.70624 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 183 | 4.3e-42 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g9644 | i0 | 88.387 | 123.402597402597 | 155 | 15 | 100 | 3 | 1 | 154 | 1728141 | 1727989 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 19004 | 183 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 14163603 | 14163603 | PRJEB73599_P_NODE_672_length_918_cov_695.152981_g539_i0 | PRJEB73599 | 672 | 918 | 695.152981 | 6381.50436558 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 959 | 0 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g539 | i0 | 93.009 | 68.9945533769063 | 658 | 45 | 92 | 1 | 1 | 657 | 1316245 | 1315588 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 63337 | 959 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 15023405 | 15023405 | PRJEB73599_P_NODE_232_length_1438_cov_15.216466_g172_i0 | PRJEB73599 | 232 | 1438 | 15.216466 | 218.81278108 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 1783 | 0 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g172 | i0 | 89.382 | 108.376216968011 | 1441 | 120 | 99 | 27 | 12 | 1435 | 915 | 2339 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 155845 | 1783 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 15437630 | 15437630 | PRJEB73599_P_NODE_2113_length_509_cov_11.039583_g1857_i0 | PRJEB73599 | 2113 | 509 | 11.039583 | 56.19147747 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 621 | 3.0299999999999997e-173 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g1857 | i0 | 88.824 | 141.60510805501 | 510 | 52 | 100 | 3 | 1 | 509 | 1315438 | 1314933 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 72077 | 621 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 15437637 | 15437637 | PRJEB73599_P_NODE_2673_length_447_cov_14.954545_g2397_i0 | PRJEB73599 | 2673 | 447 | 14.954545 | 66.84681615 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 348 | 4.93e-91 | NTclustered | gi|164510704|emb|AJ966883.1| | 48466 | g2397 | i0 | 98 | 173.612975391499 | 200 | 4 | 45 | 0 | 1 | 200 | 4547 | 4746 | Prosthecobacter vanneervenii 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 12252 | blastn | 77605 | 348 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 16298147 | 16298147 | PRJEB73599_P_NODE_3313_length_393_cov_24.766484_g3027_i0 | PRJEB73599 | 3313 | 393 | 24.766484 | 97.33228212 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 599 | 1.0699999999999997e-166 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g3027 | i0 | 94.148 | 102.641221374046 | 393 | 23 | 100 | 0 | 1 | 393 | 5154809 | 5154417 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 40338 | 599 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 16711838 | 16711838 | PRJEB73599_P_NODE_3134_length_406_cov_9.212202_g2848_i0 | PRJEB73599 | 3134 | 406 | 9.212202 | 37.40154012 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 457 | 7.0699999999999984e-124 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g2848 | i0 | 87.198 | 60.4187192118227 | 414 | 38 | 100 | 13 | 1 | 406 | 1316623 | 1316217 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 24530 | 457 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 16711881 | 16711881 | PRJEB73599_P_NODE_7814_length_195_cov_3.433735_g7527_i0 | PRJEB73599 | 7814 | 195 | 3.433735 | 6.69578325 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 333 | 5.369999999999999e-87 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g7527 | i0 | 97.436 | 28.3794871794872 | 195 | 5 | 100 | 0 | 1 | 195 | 196 | 390 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 5534 | 333 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 17986751 | 17986751 | PRJEB73599_P_NODE_4295_length_329_cov_2.116667_g4008_i0 | PRJEB73599 | 4295 | 329 | 2.116667 | 6.96383443 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 401 | 2.6699999999999992e-107 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g4008 | i0 | 88.991 | 132.747720364742 | 327 | 33 | 99 | 3 | 1 | 326 | 2317 | 1993 | Luteolibacter sp. SL250 chromosome | blastn | 43674 | 401 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 24360984 | 24360984 | PRJEB73599_P_NODE_3300_length_394_cov_7.441096_g3014_i0 | PRJEB73599 | 3300 | 394 | 7.441096 | 29.31791824 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 484 | 3.14e-132 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g3014 | i0 | 88.889 | 102.809644670051 | 396 | 40 | 100 | 4 | 1 | 394 | 3863542 | 3863149 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 40507 | 484 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 24360988 | 24360988 | PRJEB73599_P_NODE_360_length_1213_cov_17.349662_g172_i1 | PRJEB73599 | 360 | 1213 | 17.349662 | 210.45140006 | Opitutus sp. VeGlc2 | 134634 | Bacteria | Bacteria | 1864 | 0 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g172 | i1 | 94.472 | 111.737840065952 | 1212 | 63 | 99 | 4 | 4 | 1213 | 2339 | 1130 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 135538 | 1864 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;