RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJEB73599" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB73599 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3961267 3961267 PRJEB73599_P_NODE_2964_length_421_cov_5.318878_g2682_i0 PRJEB73599 2964 421 5.318878 22.39247638 Keratella quadrata 204742 Rotifera other_Eukaryota 396 1.63e-105   NTclustered gi|83285188|gb|DQ297735.1| 204742 g2682 i0 83.765 66.855106888361 425 62 100 7 1 421 738 317 Keratella quadrata 28S ribosomal RNA gene, partial sequence blastn 28146 396 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Keratella Keratella quadrata
6513292 6513292 PRJEB73599_P_NODE_6406_length_237_cov_3.038462_g6119_i0 PRJEB73599 6406 237 3.038462 7.20115494 Brachionus urceolaris 204736 Rotifera other_Eukaryota 320 5.28e-83   NTclustered gi|72153738|gb|DQ089740.1| 204736 g6119 i0 91.176 43.3459915611814 238 18 100 3 1 237 2065 1830 Brachionus urceolaris 28S ribosomal RNA gene, partial sequence blastn 10273 320 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus urceolaris
10338254 10338254 PRJEB73599_P_NODE_8869_length_173_cov_2.944444_g8582_i0 PRJEB73599 8869 173 2.944444 5.09388812 Encentrum tectipes 360662 Rotifera other_Eukaryota 176 8.26e-40   NTclustered gi|83285187|gb|DQ297734.1| 360662 g8582 i0 85.057 37.2601156069364 174 24 99 2 2 173 1 174 Encentrum tectipes 28S ribosomal RNA gene, partial sequence blastn 6446 176 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Dicranophoridae Encentrum Encentrum tectipes
11198800 11198800 PRJEB73599_P_NODE_2929_length_423_cov_8.449239_g2647_i0 PRJEB73599 2929 423 8.449239 35.74028097 Ploima 84394 Rotifera other_Eukaryota 387 9.83e-103   NTclustered gi|83285199|gb|DQ297746.1| 360681 g2647 i0 83.333 67.4397163120567 432 59 100 9 1 423 317 744 Mytilina mucronata 28S ribosomal RNA gene, partial sequence blastn 28527 387 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Mytilina Mytilina mucronata
11613665 11613665 PRJEB73599_P_NODE_3190_length_402_cov_3.613941_g2904_i0 PRJEB73599 3190 402 3.613941 14.52804282 Monommata maculata 360679 Rotifera other_Eukaryota 285 3.4899999999999997e-72   NTclustered gi|83285198|gb|DQ297745.1| 360679 g2904 i0 82.749 17.4253731343284 342 38 83 16 71 402 410 740 Monommata maculata 28S ribosomal RNA gene, partial sequence blastn 7005 285 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Notommatidae Monommata Monommata maculata
12474460 12474460 PRJEB73599_P_NODE_5910_length_254_cov_4.413333_g5623_i0 PRJEB73599 5910 254 4.413333 11.20986582 Ploima 84394 Rotifera other_Eukaryota 368 2.02e-97   NTclustered gi|61200802|gb|AY829083.1| 96446 g5623 i0 92.913 87.9803149606299 254 17 100 1 1 254 1705 1453 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 22347 370 0.994594594594595 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
19260766 19260766 PRJEB73599_P_NODE_3336_length_392_cov_2.578512_g3050_i0 PRJEB73599 3336 392 2.578512 10.10776704 Ascomorpha ovalis 360655 Rotifera other_Eukaryota 303 9.37e-78   NTclustered gi|83285183|gb|DQ297730.1| 360655 g3050 i0 80 16.4285714285714 400 69 100 10 1 392 341 737 Ascomorpha ovalis 28S ribosomal RNA gene, partial sequence blastn 6440 303 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Gastropidae Ascomorpha Ascomorpha ovalis
21811978 21811978 PRJEB73599_P_NODE_9138_length_168_cov_4.517986_g8851_i0 PRJEB73599 9138 168 4.517986 7.59021648 Encentrum tectipes 360662 Rotifera other_Eukaryota 237 3.63e-58   NTclustered gi|83285187|gb|DQ297734.1| 360662 g8851 i0 92.262 64.6428571428571 168 11 100 2 1 168 908 743 Encentrum tectipes 28S ribosomal RNA gene, partial sequence blastn 10860 237 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Dicranophoridae Encentrum Encentrum tectipes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;