RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJEB73599" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 8 ✖

tax_clade 1

bioproject 1

  • PRJEB73599 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2685233 2685233 PRJEB73599_P_NODE_1783_length_555_cov_4.627376_g1547_i0 PRJEB73599 1783 555 4.627376 25.6819368 Hexamita inflata 28002 Fornicata other_Eukaryota 534 4.4499999999999997e-147   NTclustered gi|459348792|gb|KC249997.1| 28002 g1547 i0 84.63 21.5261261261261 540 79 97 4 1 538 1322 1859 Hexamita inflata 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 11947 534 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
3961315 3961315 PRJEB73599_P_NODE_8964_length_172_cov_1.566434_g8677_i0 PRJEB73599 8964 172 1.566434 2.69426648 Hexamita sp. 28003 Fornicata other_Eukaryota 246 6.17e-61   NTclustered gi|2547715591|gb|OR291218.1| 28003 g8677 i0 92.486 19.1686046511628 173 11 100 2 1 172 453 282 Hexamita sp. isolate AYEN small subunit ribosomal RNA gene, partial sequence blastn 3297 246 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita sp.
15023409 15023409 PRJEB73599_P_NODE_4032_length_343_cov_4.009554_g3745_i0 PRJEB73599 4032 343 4.009554 13.75277022 Trepomonas 44997 Fornicata other_Eukaryota 632 9.11e-177   NTclustered gi|2592099216|gb|OR670399.1| 460177 g3745 i0 100 95.2069970845481 342 0 99 0 1 342 496 837 Trepomonas sp. PPS6 isolate NO666 small subunit ribosomal RNA gene, partial sequence blastn 32656 632 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Trepomonas Trepomonas sp. PPS6
15437687 15437687 PRJEB73599_P_NODE_8093_length_190_cov_1.447205_g7806_i0 PRJEB73599 8093 190 1.447205 2.7496895 Trepomonas sp. PPS6 460177 Fornicata other_Eukaryota 263 6.93e-66   NTclustered gi|2592099210|gb|OR670393.1| 460177 g7806 i0 91.979 35.6315789473684 187 15 98 0 4 190 539 725 Trepomonas sp. PPS6 isolate Schon small subunit ribosomal RNA gene, partial sequence blastn 6770 263 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Trepomonas Trepomonas sp. PPS6
19260765 19260765 PRJEB73599_P_NODE_3316_length_393_cov_5.760989_g3030_i0 PRJEB73599 3316 393 5.760989 22.64068677 Hexamita inflata 28002 Fornicata other_Eukaryota 477 5.2299999999999986e-130   NTclustered gi|459348792|gb|KC249997.1| 28002 g3030 i0 88.747 129.982188295165 391 42 99 2 4 393 209 598 Hexamita inflata 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 51083 477 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
20122029 20122029 PRJEB73599_P_NODE_5136_length_285_cov_4.613281_g4849_i0 PRJEB73599 5136 285 4.613281 13.14785085 Trepomonas 44997 Fornicata other_Eukaryota 516 7.77e-142   NTclustered gi|2592099221|gb|OR670404.1| 460177 g4849 i0 99.298 87.6070175438597 285 2 100 0 1 285 314 30 Trepomonas sp. PPS6 isolate 77MVwsc small subunit ribosomal RNA gene, partial sequence blastn 24968 516 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Trepomonas Trepomonas sp. PPS6
20536103 20536103 PRJEB73599_P_NODE_6697_length_228_cov_3.798995_g6410_i0 PRJEB73599 6697 228 3.798995 8.6617086 Hexamita inflata 28002 Fornicata other_Eukaryota 248 2.4199999999999997e-61   NTclustered gi|459348792|gb|KC249997.1| 28002 g6410 i0 93.902 0.719298245614035 164 10 72 0 65 228 2970 2807 Hexamita inflata 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 164 248 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
23086984 23086984 PRJEB73599_P_NODE_5479_length_271_cov_2.975207_g5192_i0 PRJEB73599 5479 271 2.975207 8.06281097 Hexamita inflata 28002 Fornicata other_Eukaryota 316 7.98e-82   NTclustered gi|459348792|gb|KC249997.1| 28002 g5192 i0 87.823 1.98892988929889 271 32 100 1 1 271 879 1148 Hexamita inflata 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 539 316 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;