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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJEB73599" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 8 ✖

tax_clade 1

bioproject 1

  • PRJEB73599 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
135218 135218 PRJEB73599_P_NODE_9041_length_170_cov_2.297872_g8754_i0 PRJEB73599 9041 170 2.297872 3.9063824 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 159 8.139999999999998e-35   NTclustered gi|290760486|gb|GQ144689.1| 361427 g8754 i0 83.626 16.7 171 26 100 2 1 170 1881 1712 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 2839 159 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
9062423 9062423 PRJEB73599_P_NODE_1828_length_549_cov_34.748077_g1586_i0 PRJEB73599 1828 549 34.748077 190.76694273 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 819 0   NTclustered gi|1270185369|gb|MG266083.1| 175275 g1586 i0 95.517 91.3806921675774 513 20 93 3 1 510 288 800 Uncultured Cercozoa clone MossITSLSU78 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 50168 819 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
10338237 10338237 PRJEB73599_P_NODE_5849_length_256_cov_5.458150_g5562_i0 PRJEB73599 5849 256 5.45815 13.972864 Lotharella vacuolata 74820 SAR_Eukaryotes SAR_Eukaryotes 91.6 4.93e-14   NTclustered gi|290760484|gb|GQ144687.1| 74820 g5562 i0 73.864 22.83203125 264 54 100 13 1 256 1842 1586 Lotharella vacuolata large subunit ribosomal RNA gene, partial sequence blastn 5845 91.6 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Lotharella Lotharella vacuolata
11613724 11613724 PRJEB73599_P_NODE_9990_length_153_cov_2.161290_g9703_i0 PRJEB73599 9990 153 2.16129 3.3067737 Gyromitus environmental sample 1227964 SAR_Eukaryotes SAR_Eukaryotes 254 3.2e-63   NTclustered gi|407196932|gb|JX545306.1| 1227964 g9703 i0 96.732 64.0718954248366 153 4 100 1 1 153 191 40 Gyromitus environmental sample clone HCA_D08-40 28S ribosomal RNA gene, partial sequence blastn 9803 254 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida     Gyromitus environmental sample
12888724 12888724 PRJEB73599_P_NODE_3531_length_376_cov_11.861671_g3245_i0 PRJEB73599 3531 376 11.861671 44.59988296 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 494 4.95e-135   NTclustered gi|238617602|gb|FJ973377.1| 188950 g3245 i0 100 76.8484042553192 267 0 71 0 1 267 341 75 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 28895 494 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
12888760 12888760 PRJEB73599_P_NODE_7411_length_206_cov_2.627119_g7124_i0 PRJEB73599 7411 206 2.627119 5.41186514 Gymnophrys sp. ATCC 50923 646463 SAR_Eukaryotes SAR_Eukaryotes 87.9 4.94e-13   NTclustered gi|238617604|gb|FJ973379.1| 646463 g7124 i0 98 0.927184466019418 50 1 24 0 18 67 2637 2686 Gymnophrys sp. ATCC 50923 28S ribosomal RNA gene, partial sequence blastn 191 87.9 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys sp. ATCC 50923
19260778 19260778 PRJEB73599_P_NODE_4836_length_299_cov_6.633333_g4549_i0 PRJEB73599 4836 299 6.633333 19.83366567 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 178 4.4e-40   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g4549 i0 80.078 33.7491638795987 256 38 84 12 38 287 3773 4021 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 10091 178 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
21811959 21811959 PRJEB73599_P_NODE_5418_length_273_cov_5.020492_g5131_i0 PRJEB73599 5418 273 5.020492 13.70594316 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 141 5.2e-29   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g5131 i0 90.654 15.5311355311355 107 8 39 2 1 106 3740 3845 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 4240 141 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;