RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJEB73599" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB73599 · 17 ✖

analysis 1

  • blastn · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2270633 2270633 PRJEB73599_P_NODE_8462_length_181_cov_5.835526_g8175_i0 PRJEB73599 8462 181 5.835526 10.56230206 Tremellomycetes 155616 Fungi Fungi 333 4.9000000000000015e-87   NTclustered gi|1897356421|ref|NG_070546.1| 143232 g8175 i0 100 115.364640883978 180 0 99 0 2 181 766 587 Vanrija pseudolonga CBS 8297 28S rRNA gene, partial sequence; from TYPE material blastn 20881 333 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Vanrija Vanrija pseudolonga
2270635 2270635 PRJEB73599_P_NODE_9922_length_154_cov_5.472000_g9635_i0 PRJEB73599 9922 154 5.472 8.42688 Malassezia 55193 Fungi Fungi 257 2.5e-64   NTclustered gi|2301912368|gb|OP432766.1| 76775 g9635 i0 97.368 98.7662337662338 152 3 99 1 1 152 265 415 Malassezia restricta voucher Morchella importuna culture strains AT63 large subunit ribosomal RNA gene, partial sequence blastn 15210 257 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
9062459 9062459 PRJEB73599_P_NODE_5968_length_252_cov_3.811659_g5681_i0 PRJEB73599 5968 252 3.811659 9.60538068 uncultured Basidiomycota 175244 Fungi Fungi 327 3.39e-85   NTclustered gi|375267970|dbj|AB663495.1| 175244 g5681 i0 99.444 72.2142857142857 180 1 71 0 1 180 232 411 Uncultured Basidiomycota gene for 26S rRNA, partial sequence, clone: 070 blastn 18198 327 1 Eukaryota Opisthokonta Fungi Basidiomycota         uncultured Basidiomycota
9923540 9923540 PRJEB73599_P_NODE_2068_length_515_cov_2.333333_g1812_i0 PRJEB73599 2068 515 2.333333 12.01666495 Malassezia 55193 Fungi Fungi 833 0   NTclustered gi|1321659621|gb|KY911094.1| 76775 g1812 i0 95.56 70.1553398058252 518 14 100 7 1 515 898 387 Malassezia restricta mitochondrion, complete genome blastn 36130 833 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
11613712 11613712 PRJEB73599_P_NODE_7710_length_198_cov_2.810651_g7423_i0 PRJEB73599 7710 198 2.810651 5.56508898 Malassezia arunalokei 1514897 Fungi Fungi 355 1.17e-93   NTclustered gi|2692937071|ref|NC_086476.1| 1514897 g7423 i0 98.99 49.1767676767677 198 2 100 0 1 198 1370 1173 Malassezia arunalokei culture CBS:13387 strain CBS13387 mitochondrion, complete genome blastn 9737 355 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia arunalokei
12888746 12888746 PRJEB73599_P_NODE_5831_length_257_cov_2.614035_g5544_i0 PRJEB73599 5831 257 2.614035 6.71806995 Malassezia restricta 76775 Fungi Fungi 464 2.5299999999999998e-126   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g5544 i0 99.222 88.1556420233463 257 2 100 0 1 257 3069 3325 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 22656 464 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
14163580 14163580 PRJEB73599_P_NODE_4472_length_318_cov_42.456747_g4185_i0 PRJEB73599 4472 318 42.456747 135.01245546 Papiliotrema terrestris 425109 Fungi Fungi 433 9.11e-117   NTclustered gi|1758753257|emb|LR697097.1| 425109 g4185 i0 91.25 144.751572327044 320 24 100 4 1 318 2510 2193 Papiliotrema terrestris partial 28S rRNA gene blastn 46031 433 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Rhynchogastremaceae Papiliotrema Papiliotrema terrestris
15023416 15023416 PRJEB73599_P_NODE_5552_length_268_cov_2.924686_g5265_i0 PRJEB73599 5552 268 2.924686 7.83815848 Malassezia 55193 Fungi Fungi 496 9.429999999999999e-136   NTclustered gi|1321659621|gb|KY911094.1| 76775 g5265 i0 100 92.7798507462687 268 0 100 0 1 268 1750 2017 Malassezia restricta mitochondrion, complete genome blastn 24865 496 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
15023423 15023423 PRJEB73599_P_NODE_8332_length_184_cov_2.296774_g8045_i0 PRJEB73599 8332 184 2.296774 4.22606416 Eukaryota 2759 Fungi Fungi 326 8.37e-85   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g8045 i0 99.441 92.6902173913043 179 1 97 0 6 184 1684 1506 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 17055 326 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17573406 17573406 PRJEB73599_P_NODE_1114_length_714_cov_23.353285_g927_i0 PRJEB73599 1114 714 23.353285 166.7424549 Fungi 4751 Fungi Fungi 394 1.0299999999999999e-104   NTclustered gi|1859735555|gb|MT644873.1| 5217 g927 i0 99.087 30.9775910364146 219 2 31 0 496 714 4804 5022 Tremella mesenterica isolate DM1159 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22118 394 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Tremellaceae Tremella Tremella mesenterica
18847198 18847198 PRJEB73599_P_NODE_1635_length_580_cov_7.246824_g1412_i0 PRJEB73599 1635 580 7.246824 42.0315792 Tremellomycetes 155616 Fungi Fungi 702 0   NTclustered gi|819940622|gb|KP294523.1| 5417 g1412 i0 96.262 71.1 428 16 74 0 1 428 658 231 Vanrija humicola strain DUCC4007 large subunit ribosomal RNA gene, partial sequence blastn 41238 702 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Vanrija Vanrija humicola
20122038 20122038 PRJEB73599_P_NODE_6616_length_230_cov_3.681592_g6329_i0 PRJEB73599 6616 230 3.681592 8.4676616 Opisthokonta 33154 Fungi Fungi 374 3.859999999999998e-99   NTclustered gi|915512607|gb|KP825390.1| 76775 g6329 i0 94.421 101.304347826087 233 10 100 1 1 230 465 233 Malassezia restricta strain ISOSEB19F 28S ribosomal RNA gene, partial sequence blastn 23300 374 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
20536057 20536057 PRJEB73599_P_NODE_1437_length_624_cov_7.403361_g1227_i0 PRJEB73599 1437 624 7.403361 46.19697264 Vanrija longa 181171 Fungi Fungi 1086 0   NTclustered gi|1897356420|ref|NG_070545.1| 181171 g1227 i0 98.077 95.2275641025641 624 12 100 0 1 624 643 20 Vanrija longa CBS 5920 28S rRNA gene, partial sequence; from TYPE material blastn 59422 1086 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Vanrija Vanrija longa
21811974 21811974 PRJEB73599_P_NODE_8298_length_185_cov_2.243590_g8011_i0 PRJEB73599 8298 185 2.24359 4.1506415 Malassezia globosa 76773 Fungi Fungi 326 8.430000000000001e-85   NTclustered gi|1805972860|gb|CP046440.1| 76773 g8011 i0 98.378 81.6594594594595 185 3 100 0 1 185 2554 2738 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 15107 326 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
22672396 22672396 PRJEB73599_P_NODE_5018_length_290_cov_7.314176_g4731_i0 PRJEB73599 5018 290 7.314176 21.2111104 Cryptococcus 5206 Fungi Fungi 368 2.35e-97   NTclustered gi|1916816077|gb|MT712037.1| 37769 g4731 i0 89.965 145 289 24 99 5 1 287 718 433 Cryptococcus gattii strain NIH34 28S ribosomal RNA gene, partial sequence; intergenic spacer 1, 5S ribosomal RNA gene, and intergenic spacer 2, complete sequence; and 18S ribosomal RNA gene, partial sequence blastn 42050 368 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus gattii
23948026 23948026 PRJEB73599_P_NODE_8159_length_188_cov_3.150943_g7872_i0 PRJEB73599 8159 188 3.150943 5.92377284 Fungi 4751 Fungi Fungi 348 1.84e-91   NTclustered gi|915512607|gb|KP825390.1| 76775 g7872 i0 100 100 188 0 100 0 1 188 38 225 Malassezia restricta strain ISOSEB19F 28S ribosomal RNA gene, partial sequence blastn 18800 348 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
25221660 25221660 PRJEB73599_P_NODE_9180_length_168_cov_1.791367_g8893_i0 PRJEB73599 9180 168 1.791367 3.00949656 Malassezia 55193 Fungi Fungi 305 9.81e-79   NTclustered gi|1321659621|gb|KY911094.1| 76775 g8893 i0 99.405 66.1547619047619 168 1 100 0 1 168 32783 32616 Malassezia restricta mitochondrion, complete genome blastn 11114 305 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;