RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJEB73599" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB73599 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11198816 11198816 PRJEB73599_P_NODE_7669_length_199_cov_5.400000_g7382_i0 PRJEB73599 7669 199 5.4 10.746 Geomyces 610258 Fungi Fungi 255 1.23e-63   NTclustered gi|411030732|gb|JX270198.1| 1254071 g7382 i0 91.848 91.713567839196 184 14 92 1 15 197 2 185 Geomyces sp. 02NH14 28S-18S ribosomal RNA intergenic spacer, partial sequence blastn 18251 257 0.992217898832685 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Thelebolales Pseudeurotiaceae Geomyces Geomyces sp. 02NH14
12888765 12888765 PRJEB73599_P_NODE_8171_length_188_cov_2.396226_g7884_i0 PRJEB73599 8171 188 2.396226 4.50490488 Octospora affinis 2163522 Fungi Fungi 60.2 9.63e-5   NTclustered gi|1942231222|gb|MW357911.1| 2163522 g7884 i0 86.207 0.308510638297872 58 5 30 3 8 64 4365 4310 Octospora affinis voucher G.M. 2016-02-06.4 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 58 60.2 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Pyronemataceae Octospora Octospora affinis
15437698 15437698 PRJEB73599_P_NODE_9333_length_165_cov_1.941176_g9046_i0 PRJEB73599 9333 165 1.941176 3.2029404 Scheffersomyces coipomensis 1788519 Fungi Fungi 54.7 0.004   NTclustered gi|459464823|gb|KC616429.1| 1788519 g9046 i0 100 0.351515151515152 29 0 18 0 97 125 72852 72824 Scheffersomyces coipomoensis isolate NRRL_Y-17651 endogenous virus ScV putative proteins and tryptophan-2,3-dioxygenase genes, complete cds blastn 58 54.7 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Scheffersomyces Scheffersomyces coipomensis
20536110 20536110 PRJEB73599_P_NODE_8337_length_184_cov_2.167742_g8050_i0 PRJEB73599 8337 184 2.167742 3.98864528 Penicillium argentinense 1131581 Fungi Fungi 115 1.97e-21   NTclustered gi|2515051690|ref|XM_056624061.1| 1131581 g8050 i0 90.698 59.804347826087 86 8 47 0 11 96 140 55 Penicillium argentinense uncharacterized protein (N7532_011570), partial mRNA blastn 11004 115 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium argentinense
21811957 21811957 PRJEB73599_P_NODE_5258_length_280_cov_6.725100_g4971_i0 PRJEB73599 5258 280 6.7251 18.83028 Plenodomus biglobosus 220672 Fungi Fungi 62.1 4.29e-5   NTclustered gi|702068366|emb|FO907002.1| 225338 g4971 i0 83.582 0.239285714285714 67 10 24 1 186 251 12953 12887 Leptosphaeria maculans brassicae wa74_scaffold00084 complete sequence blastn 67 62.1 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Leptosphaeriaceae Plenodomus Plenodomus biglobosus
21811969 21811969 PRJEB73599_P_NODE_7638_length_200_cov_2.660819_g7351_i0 PRJEB73599 7638 200 2.660819 5.321638 Exophiala viscosa 2486360 Fungi Fungi 220 4.5e-53   NTclustered gi|2669789093|ref|XM_062816061.1| 2486360 g7351 i0 86.5 143.02 200 27 100 0 1 200 449 648 Exophiala viscosa polyubiquitin (EDD37DRAFT_622539), mRNA blastn 28604 220 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Exophiala Exophiala viscosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;