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contig_metadata

27 rows where analysis = "blastn", bioproject = "PRJEB73599" and tax_kingdom = "Viridiplantae"

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tax_phylum 2

tax_clade 2

tax_superkingdom 1

tax_kingdom 1

  • Viridiplantae · 27 ✖

bioproject 1

  • PRJEB73599 · 27 ✖

analysis 1

  • blastn · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
135201 135201 PRJEB73599_P_NODE_6921_length_221_cov_5.578125_g6634_i0 PRJEB73599 6921 221 5.578125 12.32765625 Rutidosis leptorrhynchoides 125765 Plants Plants 56.5 0.002   NTclustered gi|2922556849|ref|XR_011771451.1| 125765 g6634 i0 94.444 0.606334841628959 36 2 16 0 186 221 3148 3113 PREDICTED: Rutidosis leptorrhynchoides 28S ribosomal RNA (LOC139880634), rRNA blastn 134 56.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Rutidosis Rutidosis leptorrhynchoides
995519 995519 PRJEB73599_P_NODE_6561_length_232_cov_2.389163_g6274_i0 PRJEB73599 6561 232 2.389163 5.54285816 Magnoliopsida 3398 Plants Plants 429 8.2e-116   NTclustered gi|2328347789|ref|NC_067573.1| 16915 g6274 i0 100 198 232 0 100 0 1 232 110388 110157 Helwingia japonica chloroplast, complete sequence blastn 45936 429 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Aquifoliales Helwingiaceae Helwingia Helwingia japonica
1409758 1409758 PRJEB73599_P_NODE_3722_length_363_cov_4.928144_g3436_i0 PRJEB73599 3722 363 4.928144 17.88916272 Allium semenovii 165656 Plants Plants 392 1.7899999999999994e-104   NTclustered gi|2072688532|gb|MZ019479.1| 165656 g3436 i0 86.761 174.04958677686 355 44 98 3 9 362 135562 135914 Allium semenovii chloroplast blastn 63180 392 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Amaryllidaceae Allium Allium semenovii
2270629 2270629 PRJEB73599_P_NODE_7122_length_215_cov_3.586022_g6835_i0 PRJEB73599 7122 215 3.586022 7.7099473 Chlorophyceae 3166 Plants Plants 364 2.139999999999999e-96   NTclustered gi|15281674|gb|AF395514.1| 106201 g6835 i0 97.209 99.9906976744186 215 6 100 0 1 215 1465 1679 Tetraspora sp. UTEX-LB 234 strain UTEX LB 234 26S ribosomal RNA gene, partial sequence blastn 21498 364 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Tetrasporales Tetrasporaceae Tetraspora Tetraspora sp. UTEX-LB 234
2685230 2685230 PRJEB73599_P_NODE_1603_length_588_cov_3.228980_g1382_i0 PRJEB73599 1603 588 3.22898 18.9864024 Hafniomonas laevis 436124 Plants Plants 324 1.12e-83   NTclustered gi|959124445|ref|NC_028583.1| 436124 g1382 i0 82.368 42.1292517006803 397 46 92 12 1 382 135027 134640 Hafniomonas laevis culture-collection NIES:257 chloroplast, complete genome blastn 24772 324 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Hafniomonas Hafniomonas laevis
3961277 3961277 PRJEB73599_P_NODE_3964_length_348_cov_2.686520_g3677_i0 PRJEB73599 3964 348 2.68652 9.3490896 Hafniomonas laevis 436124 Plants Plants 473 5.94e-129   NTclustered gi|959124445|ref|NC_028583.1| 436124 g3677 i0 94.481 112.324712643678 308 16 89 1 40 347 136949 137255 Hafniomonas laevis culture-collection NIES:257 chloroplast, complete genome blastn 39089 473 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Hafniomonas Hafniomonas laevis
5237709 5237709 PRJEB73599_P_NODE_2045_length_517_cov_3.536885_g1793_i0 PRJEB73599 2045 517 3.536885 18.28569545 Hafniomonas laevis 436124 Plants Plants 494 7e-135   NTclustered gi|959124445|ref|NC_028583.1| 436124 g1793 i0 84.211 131.056092843327 532 58 99 14 2 517 134506 135027 Hafniomonas laevis culture-collection NIES:257 chloroplast, complete genome blastn 67756 494 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Hafniomonas Hafniomonas laevis
7787540 7787540 PRJEB73599_P_NODE_4007_length_345_cov_3.655063_g3720_i0 PRJEB73599 4007 345 3.655063 12.60996735 Hordeum vulgare 4513 Plants Plants 91.6 6.92e-14   NTclustered gi|2133663016|ref|XR_006614513.1| 112509 g3720 i0 80.672 0.344927536231884 119 22 34 1 228 345 3124 3006 PREDICTED: Hordeum vulgare subsp. vulgare 28S ribosomal RNA (LOC123414581), rRNA blastn 119 91.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
9062430 9062430 PRJEB73599_P_NODE_2248_length_492_cov_2.492441_g1989_i0 PRJEB73599 2248 492 2.492441 12.26280972 Hafniomonas laevis 436124 Plants Plants 634 3.749999999999999e-177   NTclustered gi|959124445|ref|NC_028583.1| 436124 g1989 i0 91.045 144.591463414634 469 42 95 0 24 492 133000 132532 Hafniomonas laevis culture-collection NIES:257 chloroplast, complete genome blastn 71139 634 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Hafniomonas Hafniomonas laevis
9062489 9062489 PRJEB73599_P_NODE_9288_length_166_cov_1.635036_g9001_i0 PRJEB73599 9288 166 1.635036 2.71415976 Hafniomonas laevis 436124 Plants Plants 235 1.2899999999999998e-57   NTclustered gi|959124445|ref|NC_028583.1| 436124 g9001 i0 95.302 9.44578313253012 149 6 91 1 1 148 130761 130909 Hafniomonas laevis culture-collection NIES:257 chloroplast, complete genome blastn 1568 235 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Hafniomonas Hafniomonas laevis
11198814 11198814 PRJEB73599_P_NODE_7369_length_207_cov_4.747191_g7082_i0 PRJEB73599 7369 207 4.747191 9.82668537 Hydrodictyaceae 3103 Plants Plants 150 6.24e-32   NTclustered gi|21040380|gb|AF183479.2| 3105 g7082 i0 79.907 27.1304347826087 214 35 100 8 1 207 3241 3029 Pediastrum duplex strain UTEX LB 1364 28S ribosomal RNA gene, partial sequence blastn 5616 150 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Hydrodictyaceae Pediastrum Pediastrum duplex
11198820 11198820 PRJEB73599_P_NODE_9049_length_170_cov_2.099291_g8762_i0 PRJEB73599 9049 170 2.099291 3.5687947 Chlorophyceae 3166 Plants Plants 180 6.25e-41   NTclustered gi|9438172|gb|AF277656.1| 132190 g8762 i0 91.538 78.8705882352941 130 11 76 0 41 170 433 304 Pseudoschroederia antillarum culture SAG:15.86 strain SAG B 15.86 28S ribosomal RNA gene, partial sequence blastn 13408 180 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Schroederiaceae Pseudoschroederia Pseudoschroederia antillarum
12474464 12474464 PRJEB73599_P_NODE_7670_length_199_cov_5.000000_g7383_i0 PRJEB73599 7670 199 5 9.95 Chlamydomonadaceae 3051 Plants Plants 272 1.2199999999999999e-68   NTclustered gi|66864302|gb|DQ015757.1| 158507 g7383 i0 93.048 43.6482412060301 187 12 93 1 14 199 3228 3042 Oogamochlamys gigantea strain SAG 44.91 26S ribosomal RNA gene, partial sequence blastn 8686 274 0.992700729927007 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Oogamochlamys Oogamochlamys gigantea
12888713 12888713 PRJEB73599_P_NODE_2751_length_440_cov_3.963504_g2474_i0 PRJEB73599 2751 440 3.963504 17.4394176 Hafniomonas laevis 436124 Plants Plants 518 3.4899999999999996e-142   NTclustered gi|959124445|ref|NC_028583.1| 436124 g2474 i0 93.642 126.170454545455 346 22 95 0 3 348 135515 135170 Hafniomonas laevis culture-collection NIES:257 chloroplast, complete genome blastn 55515 518 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Hafniomonas Hafniomonas laevis
12888745 12888745 PRJEB73599_P_NODE_5611_length_265_cov_3.394068_g5324_i0 PRJEB73599 5611 265 3.394068 8.9942802 Stephanosphaera pluvialis 51712 Plants Plants 56.5 0.002   NTclustered gi|952954307|gb|KT625385.1| 51712 g5324 i0 100 20.0377358490566 30 0 11 0 236 265 2202 2173 Stephanosphaera pluvialis clone contig-65e chloroplast, partial genome blastn 5310 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Stephanosphaera Stephanosphaera pluvialis
13748925 13748925 PRJEB73599_P_NODE_6571_length_232_cov_2.113300_g6284_i0 PRJEB73599 6571 232 2.1133 4.902856 Poaceae 4479 Plants Plants 148 2.57e-31   NTclustered gi|2123588875|ref|XR_006435870.1| 4565 g6284 i0 87.597 48.5215517241379 129 14 56 2 6 134 408 282 PREDICTED: Triticum aestivum 28S ribosomal RNA (LOC123074126), rRNA blastn 11257 148 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
15437662 15437662 PRJEB73599_P_NODE_5113_length_286_cov_11.684825_g4826_i0 PRJEB73599 5113 286 11.684825 33.4185995 Pseudopediastrum boryanum 55410 Plants Plants 438 1.7399999999999996e-118   NTclustered gi|1388162763|gb|MF276983.1| 55410 g4826 i0 94.406 131.269230769231 286 15 100 1 1 286 95722 95438 Pseudopediastrum boryanum chloroplast, complete genome blastn 37543 438 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Hydrodictyaceae Pseudopediastrum Pseudopediastrum boryanum
15437674 15437674 PRJEB73599_P_NODE_6393_length_238_cov_1.861244_g6106_i0 PRJEB73599 6393 238 1.861244 4.42976072 Sesamum indicum 4182 Plants Plants 100 7.53e-17   NTclustered gi|1173814337|ref|XM_011088454.2| 4182 g6106 i0 88.235 1.71008403361345 85 8 35 2 136 219 1117 1200 PREDICTED: Sesamum indicum NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like (LOC105168390), transcript variant X2, mRNA blastn 407 100 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Pedaliaceae Sesamum Sesamum indicum
15437686 15437686 PRJEB73599_P_NODE_8053_length_191_cov_1.518519_g7766_i0 PRJEB73599 8053 191 1.518519 2.90037129 Jacobaea vulgaris 98722 Plants Plants 52.8 0.016   NTclustered gi|2918395481|emb|OZ238157.1| 98722 g7766 i0 96.875 0.167539267015707 32 0 16 1 77 107 26828179 26828148 Jacobaea vulgaris genome assembly, chromosome: 9 blastn 32 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Jacobaea Jacobaea vulgaris
16298160 16298160 PRJEB73599_P_NODE_7613_length_201_cov_2.110465_g7326_i0 PRJEB73599 7613 201 2.110465 4.24203465 Chlamydomonadales 3042 Plants Plants 263 7.419999999999999e-66   NTclustered gi|397121|emb|X68924.1| 133709 g7326 i0 95.21 129.124378109453 167 7 83 1 2 167 570 404 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 2 blastn 25954 265 0.992452830188679 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. 66.72
16711879 16711879 PRJEB73599_P_NODE_7434_length_206_cov_1.711864_g7147_i0 PRJEB73599 7434 206 1.711864 3.52643984 Alnus glutinosa 3517 Plants Plants 86.1 1.78e-12   NTclustered gi|2649024920|ref|XM_062321708.1| 3517 g7147 i0 91.935 15.5388349514563 62 4 30 1 94 155 704 764 PREDICTED: Alnus glutinosa large ribosomal subunit protein uL2m (LOC133882519), mRNA blastn 3201 86.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Betulaceae Alnus Alnus glutinosa
16711899 16711899 PRJEB73599_P_NODE_9994_length_153_cov_2.096774_g9707_i0 PRJEB73599 9994 153 2.096774 3.20806422 Hibiscus syriacus 106335 Plants Plants 76.8 7.44e-10   NTclustered gi|1965313940|ref|XM_039188856.1| 106335 g9707 i0 95.745 1.5359477124183 47 2 31 0 61 107 777 731 PREDICTED: Hibiscus syriacus 60S ribosomal protein L7-2-like (LOC120184367), mRNA blastn 235 76.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Hibiscus Hibiscus syriacus
17986722 17986722 PRJEB73599_P_NODE_1155_length_700_cov_2.754098_g966_i0 PRJEB73599 1155 700 2.754098 19.278686 Oryza sativa 4530 Plants Plants 1181 0   NTclustered gi|116641696|emb|CT837035.1| 39946 g966 i0 97.429 1 700 5 100 1 1 700 594 1280 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA119L05, full insert sequence blastn 700 1181 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
17986738 17986738 PRJEB73599_P_NODE_3075_length_411_cov_6.204188_g2790_i0 PRJEB73599 3075 411 6.204188 25.49921268 Nitella hyalina 181804 Plants Plants 89.8 3.01e-13   NTclustered gi|385153400|ref|NC_017598.1| 181804 g2790 i0 86.047 18.8734793187348 86 8 30 4 124 207 10063 9980 Nitella hyalina mitochondrion, complete genome blastn 7757 89.8 1 Eukaryota   Viridiplantae Streptophyta Charophyceae Charales Characeae Nitella Nitella hyalina
17986785 17986785 PRJEB73599_P_NODE_6995_length_219_cov_3.147368_g6708_i0 PRJEB73599 6995 219 3.147368 6.89273592 Chlamydomonas sp. UWO 241 1653778 Plants Plants 265 2.29e-66   NTclustered gi|822624806|gb|KP313859.1| 1653778 g6708 i0 88.584 35.9315068493151 219 24 100 1 1 219 6382 6165 Chlamydomonas sp. UWO 241 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7869 265 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
23948015 23948015 PRJEB73599_P_NODE_4379_length_324_cov_2.461017_g4092_i0 PRJEB73599 4379 324 2.461017 7.97369508 Polypodiales 3268 Plants Plants 76.8 1.81e-9   NTclustered gi|2050223811|gb|MZ361031.1| 41974 g4092 i0 92.593 1.5 54 2 17 2 4 57 7151 7100 Pleurosoriopsis makinoi voucher X.C. Zhang 9478 (PE) small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 486 76.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Polypodiopsida Polypodiales Polypodiaceae Pleurosoriopsis Pleurosoriopsis makinoi
24361037 24361037 PRJEB73599_P_NODE_9140_length_168_cov_4.028777_g8853_i0 PRJEB73599 9140 168 4.028777 6.76834536 Corbierea radiosa 51318 Plants Plants 305 9.81e-79   NTclustered gi|18654306|gb|L42987.1|RTCCPRGOLB 51318 g8853 i0 100 133.642857142857 165 0 98 0 4 168 1717 1553 Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product blastn 22452 305 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Corbierea Corbierea radiosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;