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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJEB73599" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 15 ✖

bioproject 1

  • PRJEB73599 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2270629 2270629 PRJEB73599_P_NODE_7122_length_215_cov_3.586022_g6835_i0 PRJEB73599 7122 215 3.586022 7.7099473 Chlorophyceae 3166 Plants Plants 364 2.139999999999999e-96   NTclustered gi|15281674|gb|AF395514.1| 106201 g6835 i0 97.209 99.9906976744186 215 6 100 0 1 215 1465 1679 Tetraspora sp. UTEX-LB 234 strain UTEX LB 234 26S ribosomal RNA gene, partial sequence blastn 21498 364 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Tetrasporales Tetrasporaceae Tetraspora Tetraspora sp. UTEX-LB 234
2685230 2685230 PRJEB73599_P_NODE_1603_length_588_cov_3.228980_g1382_i0 PRJEB73599 1603 588 3.22898 18.9864024 Hafniomonas laevis 436124 Plants Plants 324 1.12e-83   NTclustered gi|959124445|ref|NC_028583.1| 436124 g1382 i0 82.368 42.1292517006803 397 46 92 12 1 382 135027 134640 Hafniomonas laevis culture-collection NIES:257 chloroplast, complete genome blastn 24772 324 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Hafniomonas Hafniomonas laevis
3961277 3961277 PRJEB73599_P_NODE_3964_length_348_cov_2.686520_g3677_i0 PRJEB73599 3964 348 2.68652 9.3490896 Hafniomonas laevis 436124 Plants Plants 473 5.94e-129   NTclustered gi|959124445|ref|NC_028583.1| 436124 g3677 i0 94.481 112.324712643678 308 16 89 1 40 347 136949 137255 Hafniomonas laevis culture-collection NIES:257 chloroplast, complete genome blastn 39089 473 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Hafniomonas Hafniomonas laevis
5237709 5237709 PRJEB73599_P_NODE_2045_length_517_cov_3.536885_g1793_i0 PRJEB73599 2045 517 3.536885 18.28569545 Hafniomonas laevis 436124 Plants Plants 494 7e-135   NTclustered gi|959124445|ref|NC_028583.1| 436124 g1793 i0 84.211 131.056092843327 532 58 99 14 2 517 134506 135027 Hafniomonas laevis culture-collection NIES:257 chloroplast, complete genome blastn 67756 494 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Hafniomonas Hafniomonas laevis
9062430 9062430 PRJEB73599_P_NODE_2248_length_492_cov_2.492441_g1989_i0 PRJEB73599 2248 492 2.492441 12.26280972 Hafniomonas laevis 436124 Plants Plants 634 3.749999999999999e-177   NTclustered gi|959124445|ref|NC_028583.1| 436124 g1989 i0 91.045 144.591463414634 469 42 95 0 24 492 133000 132532 Hafniomonas laevis culture-collection NIES:257 chloroplast, complete genome blastn 71139 634 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Hafniomonas Hafniomonas laevis
9062489 9062489 PRJEB73599_P_NODE_9288_length_166_cov_1.635036_g9001_i0 PRJEB73599 9288 166 1.635036 2.71415976 Hafniomonas laevis 436124 Plants Plants 235 1.2899999999999998e-57   NTclustered gi|959124445|ref|NC_028583.1| 436124 g9001 i0 95.302 9.44578313253012 149 6 91 1 1 148 130761 130909 Hafniomonas laevis culture-collection NIES:257 chloroplast, complete genome blastn 1568 235 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Hafniomonas Hafniomonas laevis
11198814 11198814 PRJEB73599_P_NODE_7369_length_207_cov_4.747191_g7082_i0 PRJEB73599 7369 207 4.747191 9.82668537 Hydrodictyaceae 3103 Plants Plants 150 6.24e-32   NTclustered gi|21040380|gb|AF183479.2| 3105 g7082 i0 79.907 27.1304347826087 214 35 100 8 1 207 3241 3029 Pediastrum duplex strain UTEX LB 1364 28S ribosomal RNA gene, partial sequence blastn 5616 150 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Hydrodictyaceae Pediastrum Pediastrum duplex
11198820 11198820 PRJEB73599_P_NODE_9049_length_170_cov_2.099291_g8762_i0 PRJEB73599 9049 170 2.099291 3.5687947 Chlorophyceae 3166 Plants Plants 180 6.25e-41   NTclustered gi|9438172|gb|AF277656.1| 132190 g8762 i0 91.538 78.8705882352941 130 11 76 0 41 170 433 304 Pseudoschroederia antillarum culture SAG:15.86 strain SAG B 15.86 28S ribosomal RNA gene, partial sequence blastn 13408 180 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Schroederiaceae Pseudoschroederia Pseudoschroederia antillarum
12474464 12474464 PRJEB73599_P_NODE_7670_length_199_cov_5.000000_g7383_i0 PRJEB73599 7670 199 5 9.95 Chlamydomonadaceae 3051 Plants Plants 272 1.2199999999999999e-68   NTclustered gi|66864302|gb|DQ015757.1| 158507 g7383 i0 93.048 43.6482412060301 187 12 93 1 14 199 3228 3042 Oogamochlamys gigantea strain SAG 44.91 26S ribosomal RNA gene, partial sequence blastn 8686 274 0.992700729927007 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Oogamochlamys Oogamochlamys gigantea
12888713 12888713 PRJEB73599_P_NODE_2751_length_440_cov_3.963504_g2474_i0 PRJEB73599 2751 440 3.963504 17.4394176 Hafniomonas laevis 436124 Plants Plants 518 3.4899999999999996e-142   NTclustered gi|959124445|ref|NC_028583.1| 436124 g2474 i0 93.642 126.170454545455 346 22 95 0 3 348 135515 135170 Hafniomonas laevis culture-collection NIES:257 chloroplast, complete genome blastn 55515 518 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Hafniomonas Hafniomonas laevis
12888745 12888745 PRJEB73599_P_NODE_5611_length_265_cov_3.394068_g5324_i0 PRJEB73599 5611 265 3.394068 8.9942802 Stephanosphaera pluvialis 51712 Plants Plants 56.5 0.002   NTclustered gi|952954307|gb|KT625385.1| 51712 g5324 i0 100 20.0377358490566 30 0 11 0 236 265 2202 2173 Stephanosphaera pluvialis clone contig-65e chloroplast, partial genome blastn 5310 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Stephanosphaera Stephanosphaera pluvialis
15437662 15437662 PRJEB73599_P_NODE_5113_length_286_cov_11.684825_g4826_i0 PRJEB73599 5113 286 11.684825 33.4185995 Pseudopediastrum boryanum 55410 Plants Plants 438 1.7399999999999996e-118   NTclustered gi|1388162763|gb|MF276983.1| 55410 g4826 i0 94.406 131.269230769231 286 15 100 1 1 286 95722 95438 Pseudopediastrum boryanum chloroplast, complete genome blastn 37543 438 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Hydrodictyaceae Pseudopediastrum Pseudopediastrum boryanum
16298160 16298160 PRJEB73599_P_NODE_7613_length_201_cov_2.110465_g7326_i0 PRJEB73599 7613 201 2.110465 4.24203465 Chlamydomonadales 3042 Plants Plants 263 7.419999999999999e-66   NTclustered gi|397121|emb|X68924.1| 133709 g7326 i0 95.21 129.124378109453 167 7 83 1 2 167 570 404 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 2 blastn 25954 265 0.992452830188679 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. 66.72
17986785 17986785 PRJEB73599_P_NODE_6995_length_219_cov_3.147368_g6708_i0 PRJEB73599 6995 219 3.147368 6.89273592 Chlamydomonas sp. UWO 241 1653778 Plants Plants 265 2.29e-66   NTclustered gi|822624806|gb|KP313859.1| 1653778 g6708 i0 88.584 35.9315068493151 219 24 100 1 1 219 6382 6165 Chlamydomonas sp. UWO 241 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7869 265 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
24361037 24361037 PRJEB73599_P_NODE_9140_length_168_cov_4.028777_g8853_i0 PRJEB73599 9140 168 4.028777 6.76834536 Corbierea radiosa 51318 Plants Plants 305 9.81e-79   NTclustered gi|18654306|gb|L42987.1|RTCCPRGOLB 51318 g8853 i0 100 133.642857142857 165 0 98 0 4 168 1717 1553 Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product blastn 22452 305 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Corbierea Corbierea radiosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;