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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJEB73599" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 11 ✖

bioproject 1

  • PRJEB73599 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
135201 135201 PRJEB73599_P_NODE_6921_length_221_cov_5.578125_g6634_i0 PRJEB73599 6921 221 5.578125 12.32765625 Rutidosis leptorrhynchoides 125765 Plants Plants 56.5 0.002   NTclustered gi|2922556849|ref|XR_011771451.1| 125765 g6634 i0 94.444 0.606334841628959 36 2 16 0 186 221 3148 3113 PREDICTED: Rutidosis leptorrhynchoides 28S ribosomal RNA (LOC139880634), rRNA blastn 134 56.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Rutidosis Rutidosis leptorrhynchoides
995519 995519 PRJEB73599_P_NODE_6561_length_232_cov_2.389163_g6274_i0 PRJEB73599 6561 232 2.389163 5.54285816 Magnoliopsida 3398 Plants Plants 429 8.2e-116   NTclustered gi|2328347789|ref|NC_067573.1| 16915 g6274 i0 100 198 232 0 100 0 1 232 110388 110157 Helwingia japonica chloroplast, complete sequence blastn 45936 429 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Aquifoliales Helwingiaceae Helwingia Helwingia japonica
1409758 1409758 PRJEB73599_P_NODE_3722_length_363_cov_4.928144_g3436_i0 PRJEB73599 3722 363 4.928144 17.88916272 Allium semenovii 165656 Plants Plants 392 1.7899999999999994e-104   NTclustered gi|2072688532|gb|MZ019479.1| 165656 g3436 i0 86.761 174.04958677686 355 44 98 3 9 362 135562 135914 Allium semenovii chloroplast blastn 63180 392 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Amaryllidaceae Allium Allium semenovii
7787540 7787540 PRJEB73599_P_NODE_4007_length_345_cov_3.655063_g3720_i0 PRJEB73599 4007 345 3.655063 12.60996735 Hordeum vulgare 4513 Plants Plants 91.6 6.92e-14   NTclustered gi|2133663016|ref|XR_006614513.1| 112509 g3720 i0 80.672 0.344927536231884 119 22 34 1 228 345 3124 3006 PREDICTED: Hordeum vulgare subsp. vulgare 28S ribosomal RNA (LOC123414581), rRNA blastn 119 91.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
13748925 13748925 PRJEB73599_P_NODE_6571_length_232_cov_2.113300_g6284_i0 PRJEB73599 6571 232 2.1133 4.902856 Poaceae 4479 Plants Plants 148 2.57e-31   NTclustered gi|2123588875|ref|XR_006435870.1| 4565 g6284 i0 87.597 48.5215517241379 129 14 56 2 6 134 408 282 PREDICTED: Triticum aestivum 28S ribosomal RNA (LOC123074126), rRNA blastn 11257 148 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
15437674 15437674 PRJEB73599_P_NODE_6393_length_238_cov_1.861244_g6106_i0 PRJEB73599 6393 238 1.861244 4.42976072 Sesamum indicum 4182 Plants Plants 100 7.53e-17   NTclustered gi|1173814337|ref|XM_011088454.2| 4182 g6106 i0 88.235 1.71008403361345 85 8 35 2 136 219 1117 1200 PREDICTED: Sesamum indicum NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like (LOC105168390), transcript variant X2, mRNA blastn 407 100 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Pedaliaceae Sesamum Sesamum indicum
15437686 15437686 PRJEB73599_P_NODE_8053_length_191_cov_1.518519_g7766_i0 PRJEB73599 8053 191 1.518519 2.90037129 Jacobaea vulgaris 98722 Plants Plants 52.8 0.016   NTclustered gi|2918395481|emb|OZ238157.1| 98722 g7766 i0 96.875 0.167539267015707 32 0 16 1 77 107 26828179 26828148 Jacobaea vulgaris genome assembly, chromosome: 9 blastn 32 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Jacobaea Jacobaea vulgaris
16711879 16711879 PRJEB73599_P_NODE_7434_length_206_cov_1.711864_g7147_i0 PRJEB73599 7434 206 1.711864 3.52643984 Alnus glutinosa 3517 Plants Plants 86.1 1.78e-12   NTclustered gi|2649024920|ref|XM_062321708.1| 3517 g7147 i0 91.935 15.5388349514563 62 4 30 1 94 155 704 764 PREDICTED: Alnus glutinosa large ribosomal subunit protein uL2m (LOC133882519), mRNA blastn 3201 86.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Betulaceae Alnus Alnus glutinosa
16711899 16711899 PRJEB73599_P_NODE_9994_length_153_cov_2.096774_g9707_i0 PRJEB73599 9994 153 2.096774 3.20806422 Hibiscus syriacus 106335 Plants Plants 76.8 7.44e-10   NTclustered gi|1965313940|ref|XM_039188856.1| 106335 g9707 i0 95.745 1.5359477124183 47 2 31 0 61 107 777 731 PREDICTED: Hibiscus syriacus 60S ribosomal protein L7-2-like (LOC120184367), mRNA blastn 235 76.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Hibiscus Hibiscus syriacus
17986722 17986722 PRJEB73599_P_NODE_1155_length_700_cov_2.754098_g966_i0 PRJEB73599 1155 700 2.754098 19.278686 Oryza sativa 4530 Plants Plants 1181 0   NTclustered gi|116641696|emb|CT837035.1| 39946 g966 i0 97.429 1 700 5 100 1 1 700 594 1280 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA119L05, full insert sequence blastn 700 1181 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
23948015 23948015 PRJEB73599_P_NODE_4379_length_324_cov_2.461017_g4092_i0 PRJEB73599 4379 324 2.461017 7.97369508 Polypodiales 3268 Plants Plants 76.8 1.81e-9   NTclustered gi|2050223811|gb|MZ361031.1| 41974 g4092 i0 92.593 1.5 54 2 17 2 4 57 7151 7100 Pleurosoriopsis makinoi voucher X.C. Zhang 9478 (PE) small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 486 76.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Polypodiopsida Polypodiales Polypodiaceae Pleurosoriopsis Pleurosoriopsis makinoi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;