RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJEB673" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB673 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6513053 6513053 PRJEB673_P_NODE_7246_length_321_cov_1.318182_g6897_i0 PRJEB673 7246 321 1.318182 4.23136422 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 196 1.31e-45   NTclustered gi|359318420|gb|JN968463.2| 6161 g6897 i0 78.71 71.0218068535826 310 55 95 9 10 315 950 648 Dugesia japonica glucose-regulated protein 78 (grp78) mRNA, complete cds blastn 22798 196 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
7372844 7372844 PRJEB673_P_NODE_6906_length_330_cov_1.220339_g6557_i0 PRJEB673 6906 330 1.220339 4.0271187 Stenostomum 39238 Platyhelminthes Platyhelminthes 274 6.09e-69   NTclustered gi|209968707|gb|FJ384870.1| 52061 g6557 i0 100 45.6575757575758 148 0 45 0 183 330 1373 1226 Stenostomum leucops isolate K05_55 28S ribosomal RNA gene, partial sequence blastn 15067 274 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
10337901 10337901 PRJEB673_P_NODE_10309_length_176_cov_2.780142_g9960_i0 PRJEB673 10309 176 2.780142 4.89304992 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 326 7.92e-85   NTclustered gi|28273263|gb|AY157151.1| 52061 g9960 i0 100 81.0397727272727 176 0 100 0 1 176 2341 2516 Stenostomum leucops 28S large subunit ribosomal RNA gene, partial sequence blastn 14263 326 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
14163262 14163262 PRJEB673_P_NODE_11492_length_161_cov_0.952381_g11143_i0 PRJEB673 11492 161 0.952381 1.53333341 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 54.7 0.004   NTclustered gi|687156761|emb|LN010431.1| 99802 g11143 i0 100 0.180124223602484 29 0 18 0 77 105 11687 11715 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0010307 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
15023191 15023191 PRJEB673_P_NODE_12412_length_154_cov_1.008403_g12063_i0 PRJEB673 12412 154 1.008403 1.55294062 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 285 1.14e-72   NTclustered gi|2866376384|gb|PQ722296.1| 39377 g12063 i0 100 99.7467532467532 154 0 100 0 1 154 1373 1526 Stenostomum sp. (in: flatworms) isolate F8 small subunit ribosomal RNA gene, partial sequence blastn 15361 285 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sp. (in: flatworms)
18846976 18846976 PRJEB673_P_NODE_8295_length_288_cov_1.264822_g7946_i0 PRJEB673 8295 288 1.264822 3.64268736 Stenostomum 39238 Platyhelminthes Platyhelminthes 514 2.83e-141   NTclustered gi|209968685|gb|FJ384848.1| 52061 g7946 i0 98.955 70.8784722222222 287 3 99 0 2 288 1017 731 Stenostomum leucops isolate K04_75 28S ribosomal RNA gene, partial sequence blastn 20413 514 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
25221446 25221446 PRJEB673_P_NODE_6580_length_339_cov_1.315789_g6231_i0 PRJEB673 6580 339 1.315789 4.46052471 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 60.2 1.91e-4   NTclustered gi|2224869|gb|U53001.1|DLU53001 27895 g6231 i0 100 9.59882005899705 32 0 9 0 234 265 80 111 Dendrocoelum lacteum ribosomal RNA large subunit gene, partial sequence blastn 3254 60.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dendrocoelidae Dendrocoelum Dendrocoelum lacteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;