RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJEB673" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB673 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3961054 3961054 PRJEB673_P_NODE_7244_length_321_cov_1.527972_g6895_i0 PRJEB673 7244 321 1.527972 4.90479012 Mya arenaria 6604 Mollusca Mollusca 54.7 0.008   NTclustered gi|2427419089|ref|XM_052927617.1| 6604 g6895 i0 96.875 0.0996884735202492 32 1 10 0 186 217 8333 8364 PREDICTED: Mya arenaria uncharacterized LOC128219697 (LOC128219697), mRNA blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
6512965 6512965 PRJEB673_P_NODE_10106_length_180_cov_2.593103_g9757_i0 PRJEB673 10106 180 2.593103 4.6675854 Sthenoteuthis oualaniensis 34553 Mollusca Mollusca 171 4.0399999999999996e-38   NTclustered gi|186920083|ref|NC_010636.1| 34553 g9757 i0 84.659 89.6111111111111 176 22 96 5 1 173 2362 2189 Sthenoteuthis oualaniensis mitochondrion, complete genome blastn 16130 171 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Oegopsida Ommastrephidae Sthenoteuthis Sthenoteuthis oualaniensis
10337972 10337972 PRJEB673_P_NODE_4709_length_427_cov_2.380102_g4361_i0 PRJEB673 4709 427 2.380102 10.16303554 Amphioctopus fangsiao 515817 Mollusca Mollusca 137 1.1e-27   NTclustered gi|2186270437|gb|MT180322.1| 515817 g4361 i0 86.885 28.3044496487119 122 16 29 0 125 246 9712 9591 Amphioctopus fangsiao mitochondrion, complete genome blastn 12086 137 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Amphioctopus Amphioctopus fangsiao
19260540 19260540 PRJEB673_P_NODE_6956_length_328_cov_2.313993_g6607_i0 PRJEB673 6956 328 2.313993 7.58989704 Bradybaena similaris 145626 Mollusca Mollusca 187 8.11e-43   NTclustered gi|2912983111|dbj|AP039588.1| 145626 g6607 i0 87.273 4.41158536585366 165 20 50 1 1 164 55579203 55579367 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 7, sequence blastn 1447 187 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
19260568 19260568 PRJEB673_P_NODE_9956_length_183_cov_2.432432_g9607_i0 PRJEB673 9956 183 2.432432 4.45135056 Octopus sinensis 2607531 Mollusca Mollusca 143 8.989999999999998e-30   NTclustered gi|1914622278|ref|XM_029795136.2| 2607531 g9607 i0 88.235 22.4590163934426 119 14 65 0 1 119 1487 1605 PREDICTED: Octopus sinensis tubulin alpha-1B chain (LOC115224301), mRNA blastn 4110 143 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
20121789 20121789 PRJEB673_P_NODE_6216_length_350_cov_7.400000_g5867_i0 PRJEB673 6216 350 7.4 25.9 Cephalaspidea 69554 Mollusca Mollusca 159 1.8899999999999998e-34   NTclustered gi|1704728144|gb|MK473569.1| 413673 g5867 i0 76.512 54.1628571428571 281 56 79 9 4 280 326 52 Lamprohaminoea ovalis isolate TH74 histone 3 (H3) gene, partial cds blastn 18957 159 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Cephalaspidea Haminoeidae Lamprohaminoea Lamprohaminoea ovalis
20535872 20535872 PRJEB673_P_NODE_8877_length_229_cov_0.948454_g8528_i0 PRJEB673 8877 229 0.948454 2.17195966 Mercenaria mercenaria 6596 Mollusca Mollusca 56.5 0.002   NTclustered gi|2442010133|ref|XM_045346008.2| 6596 g8528 i0 96.97 2.52401746724891 33 1 14 0 35 67 1028 996 PREDICTED: Mercenaria mercenaria uncharacterized LOC123555358 (LOC123555358), transcript variant X1, mRNA blastn 578 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;