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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJEB66218" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB66218 · 13 ✖

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
131941 131941 PRJEB66218_P_NODE_180941_length_220_cov_2.006289_g178511_i0 PRJEB66218 180941 220 2.006289 4.4138358 Philodina roseola 96448 Rotifera other_Eukaryota 202 1.8299999999999998e-47   NTclustered gi|209867641|gb|EU637019.1| 96448 g178511 i0 87.791 9.79090909090909 172 21 78 0 2 173 26209 26038 Philodina roseola tyramine beta hydroxylase-like protein, metallophosphoesterase domain containing 1-like protein, transmembrane protein 45b-like protein, solute carrier family 7-like protein, G protein-coupled receptor-like protein, serpin 6 precursor, molybdenum cofactor-like protein, hypothetical protein, ankyrin repeat containing protein, neuronal calcium sensor family member 2-like protein, HSP70-like protein, hypothetical protein, Hox-5b, Smc-like protein, and golgi autoantigen golgin subfamily a4-like protein genes, complete cds blastn 2154 202 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
132084 132084 PRJEB66218_P_NODE_189741_length_215_cov_1.688312_g187311_i0 PRJEB66218 189741 215 1.688312 3.6298708 Philodina roseola 96448 Rotifera other_Eukaryota 99 2.4e-16   NTclustered gi|197321819|gb|EU853695.1| 96448 g187311 i0 88.235 1.43720930232558 85 7 38 3 131 212 382 298 Philodina roseola histone H2A variant H2Av1 copy 1a (H2Av1) gene, partial cds blastn 309 99 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
2683680 2683680 PRJEB66218_P_NODE_47683_length_493_cov_2058.180556_g45266_i0 PRJEB66218 47683 493 2058.180556 10146.83014108 Adineta vaga 104782 Rotifera other_Eukaryota 745 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g45266 i0 98.575 4.76876267748479 421 6 96 0 1 421 9978 10398 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 2351 745 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
3544754 3544754 PRJEB66218_P_NODE_14423_length_1092_cov_1424.323957_g12670_i0 PRJEB66218 14423 1092 1424.323957 15553.61761044 Adineta 104781 Rotifera other_Eukaryota 1960 0   NTclustered gi|1005055512|gb|KU860655.1| 1813164 g12670 i0 99.084 50.3635531135531 1092 9 100 1 1 1092 1079 2169 Adineta vaga complex sp. A JFF-2016 isolate H001 28S ribosomal RNA gene, partial sequence blastn 54997 1960 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. A JFF-2016
3957385 3957385 PRJEB66218_P_NODE_14384_length_1094_cov_476.193611_g12632_i0 PRJEB66218 14384 1094 476.193611 5209.55810434 Adineta vaga 104782 Rotifera other_Eukaryota 1166 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g12632 i0 86.594 47.7230347349177 1104 91 100 37 1 1094 5955 7011 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 52209 1166 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
8647518 8647518 PRJEB66218_P_NODE_177247_length_222_cov_94.285714_g174817_i0 PRJEB66218 177247 222 94.285714 209.31428508 root 1 Root_unresolved Root_unresolved 411 2.8199999999999996e-110   NTclustered gi|1399047|gb|U41281.1|PAU41281 44582 g174817 i0 100 100 222 0 100 0 1 222 1161 940 Philodina acuticornis 18S rRNA gene blastn 22200 411 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina acuticornis
11609734 11609734 PRJEB66218_P_NODE_140490_length_250_cov_2.417989_g138061_i0 PRJEB66218 140490 250 2.417989 6.0449725 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 285 2.05e-72   NTclustered gi|402761793|gb|JX184028.1| 104788 g138061 i0 87.2 49.94 250 32 100 0 1 250 375 624 Macrotrachela quadricornifera isolate CR cytochrome b (CYTB) gene, complete cds; mitochondrial blastn 12485 285 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
11610245 11610245 PRJEB66218_P_NODE_168250_length_228_cov_2.646707_g165820_i0 PRJEB66218 168250 228 2.646707 6.03449196 Adineta vaga 104782 Rotifera other_Eukaryota 226 1.1299999999999997e-54   NTclustered gi|187233665|gb|EU643499.1| 104782 g165820 i0 87.31 0.864035087719298 197 25 86 0 19 215 197 1 Adineta vaga ribosomal protein L26 mRNA, partial cds blastn 197 226 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
14161078 14161078 PRJEB66218_P_NODE_23012_length_800_cov_2.699594_g20854_i0 PRJEB66218 23012 800 2.699594 21.596752 Adineta vaga complex sp. C JFF-2016 1813166 Rotifera other_Eukaryota 484 6.679999999999998e-132   NTclustered gi|1005061350|gb|KU861169.1| 1813166 g20854 i0 85.622 84.8375 466 61 58 3 1 460 1005 540 Adineta vaga complex sp. C JFF-2016 isolate H4-28b 82 kDa heat shock protein gene, partial cds blastn 67870 484 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. C JFF-2016
14161827 14161827 PRJEB66218_P_NODE_40552_length_549_cov_5.409836_g38151_i0 PRJEB66218 40552 549 5.409836 29.69999964 Philodina citrina 468664 Rotifera other_Eukaryota 604 3.3099999999999984e-168   NTclustered gi|407227484|emb|FR856884.1| 468664 g38151 i0 86.775 28.6174863387978 552 61 99 11 1 548 1797 2340 Philodina citrina complete mitochondrial genome blastn 15711 604 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
16709996 16709996 PRJEB66218_P_NODE_38014_length_574_cov_2.641326_g35620_i0 PRJEB66218 38014 574 2.641326 15.16121124 Habrotrocha constricta 104786 Rotifera other_Eukaryota 617 4.449999999999999e-172   NTclustered gi|402761773|gb|JX184018.1| 104786 g35620 i0 86.111 16.2613240418118 576 76 100 4 1 574 182 755 Habrotrocha constricta cytochrome c oxidase subunit 3 (COX3) gene, complete cds; mitochondrial blastn 9334 617 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
23085805 23085805 PRJEB66218_P_NODE_62379_length_414_cov_2.830028_g59958_i0 PRJEB66218 62379 414 2.830028 11.71631592 Habrotrocha constricta 104786 Rotifera other_Eukaryota 453 9.34e-123   NTclustered gi|402761757|gb|JX184010.1| 104786 g59958 i0 86.441 17.3333333333333 413 56 99 0 1 413 205 617 Habrotrocha constricta cytochrome c oxidase subunit 2 (COX2) gene, complete cds; mitochondrial blastn 7176 453 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
25221155 25221155 PRJEB66218_P_NODE_63760_length_408_cov_1010.083573_g61337_i0 PRJEB66218 63760 408 1010.083573 4121.14097784 Adinetidae 104780 Rotifera other_Eukaryota 754 0   NTclustered gi|2537903788|gb|KM043253.2| 104782 g61337 i0 100 99.8553921568627 408 0 100 0 1 408 533 940 Adineta vaga voucher AD006 18S ribosomal RNA gene, partial sequence blastn 40741 754 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;