RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB66218" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB66218 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6512450 6512450 PRJEB66218_P_NODE_77126_length_361_cov_4.780000_g74700_i0 PRJEB66218 77126 361 4.78 17.2558 Macrostomum poznaniense 2614303 Platyhelminthes Platyhelminthes 662 0   NTclustered gi|1837893560|gb|MT429061.1| 2614303 g74700 i0 100 99.6814404432133 358 0 99 0 1 358 369 726 Macrostomum poznaniense voucher MTP_LS_2365 large subunit ribosomal RNA gene, partial sequence blastn 35985 662 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum poznaniense
9922464 9922464 PRJEB66218_P_NODE_169568_length_227_cov_27.006024_g167138_i0 PRJEB66218 169568 227 27.006024 61.30367448 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 93.5 1.19e-14   NTclustered gi|1246719163|gb|MF383122.1| 2039861 g167138 i0 90.141 27.7400881057269 71 7 31 0 150 220 1151 1221 Sluysia triapertura isolate MR1645 28S ribosomal RNA gene, partial sequence blastn 6297 93.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Uteriporidae Sluysia Sluysia triapertura
21809130 21809130 PRJEB66218_P_NODE_211078_length_208_cov_0.884354_g208648_i0 PRJEB66218 211078 208 0.884354 1.83945632 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.018   NTclustered gi|690462301|emb|LN002944.1| 99802 g208648 i0 100 0.134615384615385 28 0 13 0 111 138 7555 7528 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0002921 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
23947247 23947247 PRJEB66218_P_NODE_248179_length_190_cov_2.015504_g245747_i0 PRJEB66218 248179 190 2.015504 3.8294576 Stenostomum 39238 Platyhelminthes Platyhelminthes 346 6.690000000000001e-91   NTclustered gi|209968707|gb|FJ384870.1| 52061 g245747 i0 99.474 67.4210526315789 190 1 100 0 1 190 248 59 Stenostomum leucops isolate K05_55 28S ribosomal RNA gene, partial sequence blastn 12810 346 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;