RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJEB66218" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB66218 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2684916 2684916 PRJEB66218_P_NODE_98443_length_309_cov_4.471774_g96015_i0 PRJEB66218 98443 309 4.471774 13.81778166 Pleistophora mulleri 249366 Fungi Fungi 425 1.48e-114   NTclustered gi|134147422|gb|EF119339.1| 249366 g96015 i0 91.318 25.1359223300971 311 24 99 3 2 309 3593 3283 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 7767 425 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
10337611 10337611 PRJEB66218_P_NODE_88289_length_331_cov_6.025926_g85862_i0 PRJEB66218 88289 331 6.025926 19.94581506 Ovipleistophora diplostomuri 2023159 Fungi Fungi 442 1.5799999999999993e-119   NTclustered gi|2017842943|gb|MW811107.1| 2023159 g85862 i0 90.801 24.3655589123867 337 22 100 8 1 331 1245 1578 Ovipleistophora diplostomuri isolate 15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8065 442 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Ovipleistophora Ovipleistophora diplostomuri
15433316 15433316 PRJEB66218_P_NODE_126213_length_266_cov_4.946341_g123784_i0 PRJEB66218 126213 266 4.946341 13.15726706 Vavraia culicis 103449 Fungi Fungi 291 4.74e-74   NTclustered gi|667636757|ref|XR_552273.1| 948595 g123784 i0 86.667 27.6616541353383 270 26 100 7 1 266 659 396 Vavraia culicis subsp. floridensis 28S ribosomal RNA (VCUG_02832), partial rRNA blastn 7358 291 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis
17982661 17982661 PRJEB66218_P_NODE_134655_length_256_cov_20.635897_g132226_i0 PRJEB66218 134655 256 20.635897 52.82789632 Vavraia culicis 103449 Fungi Fungi 305 1.62e-78   NTclustered gi|667636757|ref|XR_552273.1| 948595 g132226 i0 88.281 2 256 29 100 1 1 256 2634 2380 Vavraia culicis subsp. floridensis 28S ribosomal RNA (VCUG_02832), partial rRNA blastn 512 305 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis
21808890 21808890 PRJEB66218_P_NODE_19558_length_893_cov_19.365385_g17517_i0 PRJEB66218 19558 893 19.365385 172.93288805 Heterosporis sp. NBDP-2013a 1289055 Fungi Fungi 75 1.92e-8   NTclustered gi|448278458|gb|KC137554.1| 1289055 g17517 i0 95.652 0.105263157894737 46 2 5 0 561 606 2917 2962 Heterosporis sp. NBDP-2013a isolate MN/CISCO small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 94 75 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
25220276 25220276 PRJEB66218_P_NODE_131160_length_260_cov_3.768844_g128731_i0 PRJEB66218 131160 260 3.768844 9.7989944 Glugeidae 36735 Fungi Fungi 424 4.36e-114   NTclustered gi|7161819|emb|AJ252951.1| 103443 g128731 i0 96.85 96.6923076923077 254 7 97 1 8 260 556 809 Loma acerinae 16S rRNA gene blastn 25140 425 0.997647058823529 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Loma Loma acerinae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;