RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB66218" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB66218 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2269852 2269852 PRJEB66218_P_NODE_237222_length_203_cov_0.915493_g234791_i0 PRJEB66218 237222 203 0.915493 1.85845079 Bacteria 2 Bacteria Bacteria 243 9.78e-60   NTclustered gi|2874253742|emb|OY969585.1| 2026749 g234791 i0 88.177 569.137931034483 203 24 100 0 1 203 459441 459643 MAG: Ignavibacteriota bacterium isolate MFD03726.bin.c.11 genome assembly, chromosome: 1 blastn 115535 243 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
20533160 20533160 PRJEB66218_P_NODE_198817_length_211_cov_0.866667_g196387_i0 PRJEB66218 198817 211 0.866667 1.82866737 Ignavibacteria bacterium 2053306 Bacteria Bacteria 148 2.3e-31   NTclustered gi|1858604176|gb|CP054675.1| 2053306 g196387 i0 85.816 26.7867298578199 141 18 66 2 68 207 873795 873656 Ignavibacteria bacterium isolate Ch128a chromosome, complete genome blastn 5652 148 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;