contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJEB66218" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1405254 | 1405254 | PRJEB66218_P_NODE_118142_length_277_cov_2.388889_g115713_i0 | PRJEB66218 | 118142 | 277 | 2.388889 | 6.61722253 | Gemmatimonas phototrophica | 1379270 | Bacteria | Bacteria | 329 | 1.05e-85 | NTclustered | gi|1015602748|gb|CP011454.1| | 1379270 | g115713 | i0 | 88.129 | 123.01083032491 | 278 | 31 | 100 | 2 | 1 | 277 | 2077634 | 2077358 | Gemmatimonas phototrophica strain AP64, complete genome | blastn | 34074 | 329 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas phototrophica | |
| 5233028 | 5233028 | PRJEB66218_P_NODE_107125_length_294_cov_1.394850_g104696_i0 | PRJEB66218 | 107125 | 294 | 1.39485 | 4.100859 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 510 | 3.74e-140 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g104696 | i0 | 98.282 | 67.6462585034014 | 291 | 5 | 99 | 0 | 4 | 294 | 421021 | 421311 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 19888 | 510 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 5233226 | 5233226 | PRJEB66218_P_NODE_116205_length_280_cov_1.547945_g113776_i0 | PRJEB66218 | 116205 | 280 | 1.547945 | 4.334246 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 335 | 2.2899999999999993e-87 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g113776 | i0 | 88.256 | 87.6035714285714 | 281 | 31 | 99 | 2 | 2 | 280 | 802428 | 802708 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 24529 | 335 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 5234895 | 5234895 | PRJEB66218_P_NODE_207225_length_209_cov_0.878378_g204795_i0 | PRJEB66218 | 207225 | 209 | 0.878378 | 1.83581002 | Pseudogemmatithrix spongiicola | 3062599 | Bacteria | Bacteria | 265 | 2.16e-66 | NTclustered | gi|2557479348|gb|CP130613.1| | 3062599 | g204795 | i0 | 90 | 63.0526315789474 | 210 | 14 | 99 | 7 | 3 | 209 | 1552716 | 1552921 | Pseudogemmatithrix spongiicola strain 318 chromosome, complete genome | blastn | 13178 | 265 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Pseudogemmatithrix | Pseudogemmatithrix spongiicola | |
| 5235491 | 5235491 | PRJEB66218_P_NODE_248365_length_190_cov_2.007752_g245933_i0 | PRJEB66218 | 248365 | 190 | 2.007752 | 3.8147288 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 307 | 3.16e-79 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g245933 | i0 | 95.789 | 204.878947368421 | 190 | 8 | 100 | 0 | 1 | 190 | 1102352 | 1102163 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 38927 | 307 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 5236849 | 5236849 | PRJEB66218_P_NODE_77005_length_362_cov_1.538206_g74579_i0 | PRJEB66218 | 77005 | 362 | 1.538206 | 5.56830572 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 444 | 4.85e-120 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g74579 | i0 | 88.981 | 87.0635359116022 | 363 | 35 | 99 | 3 | 1 | 360 | 1903552 | 1903192 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 31517 | 444 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 6510419 | 6510419 | PRJEB66218_P_NODE_200526_length_210_cov_1.744966_g198096_i0 | PRJEB66218 | 200526 | 210 | 1.744966 | 3.6644286 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 281 | 2.16e-71 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g198096 | i0 | 91.038 | 67.9285714285714 | 212 | 14 | 99 | 4 | 1 | 209 | 423650 | 423441 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 14265 | 281 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 7786238 | 7786238 | PRJEB66218_P_NODE_58627_length_431_cov_12.140541_g56207_i0 | PRJEB66218 | 58627 | 431 | 12.140541 | 52.32573171 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 95.3 | 6.81e-15 | NTclustered | gi|2893358392|emb|OZ220683.1| | 2026742 | g56207 | i0 | 79.72 | 15.1716937354988 | 143 | 20 | 31 | 6 | 95 | 229 | 2179701 | 2179842 | MAG: Gemmatimonadota bacterium isolate c4f6f2ca-7934-440c-833b-e1b430e415c5 genome assembly, chromosome: 1 | blastn | 6539 | 95.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 9058199 | 9058199 | PRJEB66218_P_NODE_127248_length_265_cov_1.862745_g124819_i0 | PRJEB66218 | 127248 | 265 | 1.862745 | 4.93627425 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 211 | 3.78e-50 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g124819 | i0 | 81.413 | 54.2452830188679 | 269 | 40 | 100 | 9 | 1 | 265 | 420831 | 421093 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 14375 | 211 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 9059698 | 9059698 | PRJEB66218_P_NODE_213408_length_208_cov_0.884354_g210978_i0 | PRJEB66218 | 213408 | 208 | 0.884354 | 1.83945632 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 327 | 2.7e-85 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g210978 | i0 | 95.631 | 316.778846153846 | 206 | 6 | 99 | 1 | 1 | 206 | 2958213 | 2958011 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 65890 | 327 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 12885357 | 12885357 | PRJEB66218_P_NODE_169911_length_227_cov_2.048193_g167481_i0 | PRJEB66218 | 169911 | 227 | 2.048193 | 4.64939811 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 303 | 5.06e-78 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g167481 | i0 | 91.071 | 188.189427312775 | 224 | 20 | 99 | 0 | 3 | 226 | 1104388 | 1104165 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 42719 | 303 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 12888086 | 12888086 | PRJEB66218_P_NODE_83671_length_343_cov_2.241135_g81244_i0 | PRJEB66218 | 83671 | 343 | 2.241135 | 7.68709305 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 333 | 1.03e-86 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g81244 | i0 | 84.527 | 177.381924198251 | 349 | 41 | 100 | 13 | 1 | 343 | 1904730 | 1904389 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 60842 | 333 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 14160162 | 14160162 | PRJEB66218_P_NODE_169992_length_227_cov_1.957831_g167562_i0 | PRJEB66218 | 169992 | 227 | 1.957831 | 4.44427637 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 364 | 2.289999999999999e-96 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g167562 | i0 | 95.595 | 304.960352422907 | 227 | 10 | 100 | 0 | 1 | 227 | 172236 | 172462 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 69226 | 364 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 16297299 | 16297299 | PRJEB66218_P_NODE_230433_length_204_cov_0.909091_g228003_i0 | PRJEB66218 | 230433 | 204 | 0.909091 | 1.85454564 | Gemmatimonas | 173479 | Bacteria | Bacteria | 337 | 4.39e-88 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g228003 | i0 | 96.552 | 375.867647058824 | 203 | 7 | 99 | 0 | 2 | 204 | 2934 | 2732 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 76677 | 337 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 20532290 | 20532290 | PRJEB66218_P_NODE_146317_length_245_cov_0.989130_g143888_i0 | PRJEB66218 | 146317 | 245 | 0.98913 | 2.4233685 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 320 | 5.49e-83 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g143888 | i0 | 90.947 | 175.269387755102 | 243 | 14 | 98 | 7 | 1 | 239 | 173245 | 173007 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 42941 | 320 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 20533755 | 20533755 | PRJEB66218_P_NODE_23937_length_780_cov_2.449235_g21754_i0 | PRJEB66218 | 23937 | 780 | 2.449235 | 19.104033 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 1136 | 0 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g21754 | i0 | 92.967 | 340.461538461538 | 782 | 51 | 100 | 4 | 1 | 780 | 1102056 | 1102835 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 265560 | 1136 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;