RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB66218" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB66218 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2680622 2680622 PRJEB66218_P_NODE_106763_length_294_cov_4.381974_g104334_i0 PRJEB66218 106763 294 4.381974 12.88300356 Cryptomycota sp. 2012228 Fungi Fungi 228 4.219999999999999e-55   NTclustered gi|2468790980|gb|OQ702912.1| 2012228 g104334 i0 83.2 47.5170068027211 250 41 85 1 45 294 3811 4059 Cryptomycota sp. isolate PSC211 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13970 228 1 Eukaryota Opisthokonta Fungi Cryptomycota         Cryptomycota sp.
3957363 3957363 PRJEB66218_P_NODE_142664_length_248_cov_1.759358_g140235_i0 PRJEB66218 142664 248 1.759358 4.36320784 Rozella sp. 1932610 Fungi Fungi 104 6.11e-18   NTclustered gi|2468791023|gb|OQ702923.1| 1932610 g140235 i0 92 40.3870967741936 75 4 30 2 145 218 4117 4044 Rozella sp. isolate PSC249 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 10016 104 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella sp.
17982388 17982388 PRJEB66218_P_NODE_122355_length_271_cov_4.438095_g119926_i0 PRJEB66218 122355 271 4.438095 12.02723745 Rozella sp. JEL347 276837 Fungi Fungi 80.5 1.14e-10   NTclustered gi|82398068|gb|DQ273766.1| 276837 g119926 i0 92.727 0.328413284132841 55 4 20 0 1 55 62 8 Rozella sp. JEL347 isolate AFTOL-ID 16 28S ribosomal RNA gene, partial sequence blastn 89 80.5 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella sp. JEL347

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;