RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJEB66218" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB66218 · 17 ✖

analysis 1

  • blastn · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3957022 3957022 PRJEB66218_P_NODE_127224_length_265_cov_1.906863_g124795_i0 PRJEB66218 127224 265 1.906863 5.05318695 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 52.8 0.024   NTclustered gi|2782897622|ref|XM_067067727.1| 252671 g124795 i0 92.308 0.147169811320755 39 0 15 2 2 40 4144 4109 PREDICTED: Clytia hemisphaerica DNA topoisomerase 2-alpha-like (LOC136811122), mRNA blastn 39 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
6510481 6510481 PRJEB66218_P_NODE_204566_length_209_cov_2.750000_g202136_i0 PRJEB66218 204566 209 2.75 5.7475 Kudoa carcharhini 858677 Cnidaria other_Eukaryota 63.9 8.46e-6   NTclustered gi|300089085|gb|GU446630.1| 858677 g202136 i0 91.304 16.5263157894737 46 4 22 0 1 46 43 88 Kudoa carcharhini isolate Cc1 28S ribosomal RNA gene, partial sequence blastn 3454 63.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Multivalvulida Kudoidae Kudoa Kudoa carcharhini
7372826 7372826 PRJEB66218_P_NODE_97646_length_311_cov_1.560000_g95218_i0 PRJEB66218 97646 311 1.56 4.8516 Opisthokonta 33154 Cnidaria other_Eukaryota 54.7 0.008   NTclustered gi|2917940724|emb|OZ237563.1| 6108 g95218 i0 100 0.890675241157556 29 0 9 0 8 36 8902458 8902486 Anemonia sulcata genome assembly, chromosome: 9 blastn 277 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
10333568 10333568 PRJEB66218_P_NODE_109169_length_290_cov_106.266376_g106740_i0 PRJEB66218 109169 290 106.266376 308.1724904 Palliatus indecorus 371550 Cnidaria other_Eukaryota 119 2.61e-22   NTclustered gi|241911763|gb|FJ417069.1| 371550 g106740 i0 91.765 30.0827586206897 85 7 29 0 206 290 101 17 Palliatus indecorus isolate M0424 28S large subunit ribosomal RNA gene, partial sequence blastn 8724 119 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Sphaerosporidae Palliatus Palliatus indecorus
12473165 12473165 PRJEB66218_P_NODE_138630_length_252_cov_2.041885_g136201_i0 PRJEB66218 138630 252 2.041885 5.1455502 Opisthokonta 33154 Cnidaria other_Eukaryota 58.4 4.91e-4   NTclustered gi|2917940766|emb|OZ237573.1| 6108 g136201 i0 97.059 0.424603174603175 34 1 13 0 219 252 4618547 4618514 Anemonia sulcata genome assembly, chromosome: 19 blastn 107 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
12885790 12885790 PRJEB66218_P_NODE_194511_length_212_cov_2.092715_g192081_i0 PRJEB66218 194511 212 2.092715 4.4365558 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 219 1.74e-52   NTclustered gi|2782957080|ref|XM_067080290.1| 252671 g192081 i0 86.139 26.4528301886792 202 28 95 0 1 202 5227 5428 PREDICTED: Clytia hemisphaerica serine/threonine-protein phosphatase PP1-beta catalytic subunit (LOC136824125), transcript variant X2, mRNA blastn 5608 219 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
14159664 14159664 PRJEB66218_P_NODE_143092_length_248_cov_1.219251_g140663_i0 PRJEB66218 143092 248 1.219251 3.02374248 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 169 2.13e-37   NTclustered gi|2729081375|ref|XM_065203156.1| 499914 g140663 i0 81.773 15.383064516129 203 35 81 2 15 216 603 402 PREDICTED: Rhopilema esculentum ruvB-like 1 (LOC135686810), mRNA blastn 3815 169 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
16297134 16297134 PRJEB66218_P_NODE_193773_length_213_cov_1.282895_g191343_i0 PRJEB66218 193773 213 1.282895 2.73256635 Montipora 46703 Cnidaria other_Eukaryota 93.5 1.1e-14   NTclustered gi|2812194374|ref|XM_068863792.1| 246305 g191343 i0 80.992 1.13615023474178 121 20 56 3 80 198 109 228 PREDICTED: Montipora capricornis E3 ubiquitin-protein ligase RBX1 (LOC138016610), mRNA blastn 242 93.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis
16710537 16710537 PRJEB66218_P_NODE_59654_length_426_cov_13.320548_g57233_i0 PRJEB66218 59654 426 13.320548 56.74553448 Sphaeromyxa zaharoni 275449 Cnidaria other_Eukaryota 60.2 2.45e-4   NTclustered gi|2663986569|emb|OY751524.1| 275449 g57233 i0 100 1.56338028169014 32 0 8 0 130 161 6334 6365 Sphaeromyxa zaharoni isolate 24.2.2011 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA complete sequences blastn 666 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Sphaeromyxidae Sphaeromyxa Sphaeromyxa zaharoni
16710994 16710994 PRJEB66218_P_NODE_78854_length_356_cov_3.284746_g76428_i0 PRJEB66218 78854 356 3.284746 11.69369576 Clytia sp. 3 AFC-2016 1886627 Cnidaria other_Eukaryota 73.1 2.59e-8   NTclustered gi|1069323992|gb|KX665509.1| 1886627 g76428 i0 77.778 12.4915730337079 135 18 36 11 228 354 1735 1605 Clytia sp. 3 AFC-2016 voucher MZUSP:2801 28S ribosomal RNA gene, partial sequence blastn 4447 73.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia sp. 3 AFC-2016
19258877 19258877 PRJEB66218_P_NODE_37216_length_582_cov_11.080614_g34827_i0 PRJEB66218 37216 582 11.080614 64.48917348 Eunicella cavolini 317547 Cnidaria other_Eukaryota 67.6 2.05e-6   NTclustered gi|2918369537|emb|OZ237719.1| 317547 g34827 i0 97.436 21.9020618556701 39 1 7 0 6 44 25307668 25307706 Eunicella cavolini genome assembly, chromosome: 3 blastn 12747 67.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
19259839 19259839 PRJEB66218_P_NODE_74516_length_369_cov_4.334416_g72091_i0 PRJEB66218 74516 369 4.334416 15.99399504 Buddenbrockia bryozoides 3280430 Cnidaria other_Eukaryota 62.1 5.83e-5   NTclustered gi|237512524|gb|FJ981817.1| 3280430 g72091 i0 97.222 8.45257452574526 36 1 10 0 71 106 1765 1800 Buddenbrockia plumatellae 28S large subunit ribosomal RNA gene, partial sequence blastn 3119 62.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Malacovalvulida Saccosporidae Buddenbrockia Buddenbrockia bryozoides
21809015 21809015 PRJEB66218_P_NODE_203818_length_210_cov_0.872483_g201388_i0 PRJEB66218 203818 210 0.872483 1.8322143 Eunicella cavolini 317547 Cnidaria other_Eukaryota 56.5 0.001   NTclustered gi|2918369564|emb|OZ237730.1| 317547 g201388 i0 96.97 0.423809523809524 33 1 16 0 146 178 13006051 13006083 Eunicella cavolini genome assembly, chromosome: 14 blastn 89 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
21809363 21809363 PRJEB66218_P_NODE_227978_length_204_cov_15.027972_g225548_i0 PRJEB66218 227978 204 15.027972 30.65706288 Sinuolinea arctica 1483224 Cnidaria other_Eukaryota 71.3 4.91e-8   NTclustered gi|605060087|gb|KF874227.1| 1483224 g225548 i0 90.741 0.416666666666667 54 4 26 1 42 94 1326 1273 Sinuolinea arctica 28S ribosomal RNA gene, partial sequence blastn 85 71.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Sinuolineidae Sinuolinea Sinuolinea arctica
24358170 24358170 PRJEB66218_P_NODE_207260_length_209_cov_0.878378_g204830_i0 PRJEB66218 207260 209 0.878378 1.83581002 Anemonia sulcata 6108 Cnidaria other_Eukaryota 65.8 2.35e-6   NTclustered gi|2917940737|emb|OZ237566.1| 6108 g204830 i0 97.368 23.1722488038278 38 1 18 0 161 198 11015332 11015295 Anemonia sulcata genome assembly, chromosome: 12 blastn 4843 65.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
25220367 25220367 PRJEB66218_P_NODE_147880_length_243_cov_1.785714_g145451_i0 PRJEB66218 147880 243 1.785714 4.33928502 Metazoa 33208 Cnidaria other_Eukaryota 58.4 4.71e-4   NTclustered gi|2917940759|emb|OZ237572.1| 6108 g145451 i0 92.683 13.0164609053498 41 2 17 1 9 49 10481395 10481434 Anemonia sulcata genome assembly, chromosome: 18 blastn 3163 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
25221285 25221285 PRJEB66218_P_NODE_79760_length_354_cov_1.331058_g77334_i0 PRJEB66218 79760 354 1.331058 4.71194532 Metazoa 33208 Cnidaria other_Eukaryota 58.4 7.2e-4   NTclustered gi|2917940696|emb|OZ237557.1| 6108 g77334 i0 97.059 8.5819209039548 34 1 10 0 314 347 959244 959211 Anemonia sulcata genome assembly, chromosome: 3 blastn 3038 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;