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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJEB66218" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB66218 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3960486 3960486 PRJEB66218_P_NODE_79344_length_355_cov_1.738095_g76918_i0 PRJEB66218 79344 355 1.738095 6.17023725 Polychytrium aggregatum 110093 Fungi Fungi 235 3.11e-57   NTclustered gi|2432132411|ref|XM_053109501.1| 110093 g76918 i0 82.528 46.1323943661972 269 45 75 2 88 355 904 637 Polychytrium aggregatum ribosomal protein L3-domain-containing protein (BJ171DRAFT_489537), mRNA blastn 16377 235 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
5233183 5233183 PRJEB66218_P_NODE_114165_length_283_cov_1.418919_g111736_i0 PRJEB66218 114165 283 1.418919 4.01554077 Polychytrium aggregatum 110093 Fungi Fungi 244 4.01e-60   NTclustered gi|2432156890|ref|XM_053107738.1| 110093 g111736 i0 82.332 76.7243816254417 283 48 99 2 1 282 732 451 Polychytrium aggregatum 60S ribosomal protein L2 (BJ171DRAFT_425809), partial mRNA blastn 21713 244 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
6509122 6509122 PRJEB66218_P_NODE_12666_length_1195_cov_2.589947_g11028_i0 PRJEB66218 12666 1195 2.589947 30.94986665 Spizellomyces punctatus 109760 Fungi Fungi 459 6.15e-124   NTclustered gi|1026947984|ref|XM_016748469.1| 645134 g11028 i0 80.357 48.3138075313808 616 111 51 9 328 940 889 281 Spizellomyces punctatus DAOM BR117 40S ribosomal protein S2 (SPPG_00135), mRNA blastn 57735 459 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
7786876 7786876 PRJEB66218_P_NODE_85427_length_338_cov_19.433213_g83000_i0 PRJEB66218 85427 338 19.433213 65.68425994 uncultured Chytridiomycota 175247 Fungi Fungi 78.7 5.26e-10   NTclustered gi|262235206|gb|GQ995417.1| 175247 g83000 i0 81.633 18.4763313609467 98 15 29 3 215 311 830 925 Uncultured Chytridiomycota clone T1P1AeC08 18S ribosomal RNA gene, partial sequence blastn 6245 78.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota         uncultured Chytridiomycota
11613205 11613205 PRJEB66218_P_NODE_94250_length_318_cov_1.431907_g91822_i0 PRJEB66218 94250 318 1.431907 4.55346426 Polychytrium aggregatum 110093 Fungi Fungi 215 3.59e-51   NTclustered gi|2432155512|ref|XM_053111530.1| 110093 g91822 i0 81.203 38.4276729559748 266 50 84 0 21 286 469 204 Polychytrium aggregatum ras-related protein-like protein ypt1 (BJ171DRAFT_510992), mRNA blastn 12220 215 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
12884227 12884227 PRJEB66218_P_NODE_114931_length_282_cov_1.248869_g112502_i0 PRJEB66218 114931 282 1.248869 3.52181058 Polychytrium aggregatum 110093 Fungi Fungi 189 1.9e-43   NTclustered gi|2432168590|ref|XM_053112370.1| 110093 g112502 i0 81.624 26.0957446808511 234 37 82 6 1 231 2265 2495 Polychytrium aggregatum P-loop containing nucleoside triphosphate hydrolase protein (BJ171DRAFT_519711), mRNA blastn 7359 189 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
14159418 14159418 PRJEB66218_P_NODE_132312_length_259_cov_1.747475_g129883_i0 PRJEB66218 132312 259 1.747475 4.52596025 Fimicolochytrium jonesii 1396493 Fungi Fungi 135 2.28e-27   NTclustered gi|2432087517|ref|XM_053072757.1| 1396493 g129883 i0 91.089 40.1930501930502 101 8 39 1 153 252 254 354 Fimicolochytrium jonesii P-loop containing nucleoside triphosphate hydrolase protein (EV422DRAFT_569324), partial mRNA blastn 10410 135 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
15434565 15434565 PRJEB66218_P_NODE_190453_length_215_cov_1.136364_g188023_i0 PRJEB66218 190453 215 1.136364 2.4431826 Polychytrium aggregatum 110093 Fungi Fungi 196 8.27e-46   NTclustered gi|2432146664|ref|XM_053113161.1| 110093 g188023 i0 85.946 71.6186046511628 185 24 86 2 17 200 208 391 Polychytrium aggregatum 40S ribosomal protein S22-A (BJ171DRAFT_558627), partial mRNA blastn 15398 196 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
24357711 24357711 PRJEB66218_P_NODE_178960_length_221_cov_3.212500_g176530_i0 PRJEB66218 178960 221 3.2125 7.099625 Synchytrium microbalum 1806994 Fungi Fungi 156 1.45e-33   NTclustered gi|1759141776|ref|XM_031166210.1| 1806994 g176530 i0 82.065 3.3393665158371 184 31 83 2 38 220 305 123 Synchytrium microbalum uncharacterized protein (SmJEL517_g00280), partial mRNA blastn 738 156 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
24360419 24360419 PRJEB66218_P_NODE_89520_length_328_cov_17.955056_g87093_i0 PRJEB66218 89520 328 17.955056 58.89258368 Synchytrium sp. 1971732 Fungi Fungi 93.5 1.82e-14   NTclustered gi|1168020523|gb|KY800404.1| 1971732 g87093 i0 83.168 0.307926829268293 101 17 31 0 3 103 1006 906 Synchytrium sp. voucher BPI 893319 large subunit ribosomal RNA gene, partial sequence blastn 101 93.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;