RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB66218" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB66218 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3957657 3957657 PRJEB66218_P_NODE_159624_length_234_cov_2.254335_g157194_i0 PRJEB66218 159624 234 2.254335 5.2751439 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 333 6.679999999999999e-87   NTclustered gi|2621701202|emb|OY759724.1| 2035772 g157194 i0 92.308 323.764957264957 234 18 100 0 1 234 2374025 2374258 MAG: Candidatus Omnitrophota bacterium isolate 1a5844f9-839a-4d7b-a7f9-2444bab12bdd genome assembly, chromosome: 1 blastn 75761 333 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
3958077 3958077 PRJEB66218_P_NODE_183864_length_218_cov_3.471338_g181434_i0 PRJEB66218 183864 218 3.471338 7.56751684 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 213 8.35e-51   NTclustered gi|2621701202|emb|OY759724.1| 2035772 g181434 i0 87.568 203.155963302752 185 21 85 2 31 215 2372295 2372477 MAG: Candidatus Omnitrophota bacterium isolate 1a5844f9-839a-4d7b-a7f9-2444bab12bdd genome assembly, chromosome: 1 blastn 44288 213 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
6508651 6508651 PRJEB66218_P_NODE_105046_length_297_cov_3.605932_g102617_i0 PRJEB66218 105046 297 3.605932 10.70961804 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 291 5.37e-74   NTclustered gi|2621701202|emb|OY759724.1| 2035772 g102617 i0 84.642 190.646464646465 293 43 98 2 6 297 2373194 2372903 MAG: Candidatus Omnitrophota bacterium isolate 1a5844f9-839a-4d7b-a7f9-2444bab12bdd genome assembly, chromosome: 1 blastn 56622 291 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
7786823 7786823 PRJEB66218_P_NODE_82827_length_345_cov_3.669014_g80400_i0 PRJEB66218 82827 345 3.669014 12.6580983 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 451 2.75e-122   NTclustered gi|2621701202|emb|OY759724.1| 2035772 g80400 i0 90.435 178.344927536232 345 30 99 3 1 343 2372855 2372512 MAG: Candidatus Omnitrophota bacterium isolate 1a5844f9-839a-4d7b-a7f9-2444bab12bdd genome assembly, chromosome: 1 blastn 61529 451 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;